UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 5FV9 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5FV9_UDP_A_1570 | 77% | 22% | 0.126 | 0.967 | 1.52 | 1.86 | 4 | 9 | 3 | 0 | 100% | 1 |
| 5FV9_UDP_C_1570 | 66% | 28% | 0.146 | 0.953 | 1.36 | 1.69 | 5 | 7 | 1 | 0 | 100% | 1 |
| 5FV9_UDP_E_1570 | 62% | 30% | 0.146 | 0.939 | 1.27 | 1.66 | 3 | 6 | 2 | 0 | 100% | 0.5 |
| 5FV9_UDP_D_1555 | 59% | 30% | 0.159 | 0.943 | 1.08 | 1.84 | 2 | 8 | 2 | 0 | 100% | 1 |
| 5FV9_UDP_F_1570 | 46% | 22% | 0.167 | 0.902 | 1.55 | 1.85 | 4 | 9 | 6 | 0 | 100% | 0.5 |
| 5FV9_UDP_B_1572 | 39% | 29% | 0.184 | 0.891 | 1.25 | 1.72 | 4 | 6 | 8 | 0 | 100% | 0.5 |
| 4PHR_UDP_A_301 | 100% | 43% | 0.042 | 0.989 | 0.84 | 1.41 | - | 4 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 47% | 0.046 | 0.992 | 1.19 | 0.9 | 2 | 1 | 0 | 0 | 100% | 1 |
| 1GX4_UDP_A_401 | 100% | 34% | 0.046 | 0.991 | 1.68 | 1.03 | 2 | 3 | 0 | 0 | 100% | 1 |
| 5GY7_UDP_B_401 | 99% | 45% | 0.047 | 0.987 | 0.98 | 1.18 | 1 | 5 | 0 | 0 | 100% | 1 |
| 3U2V_UDP_B_270 | 99% | 35% | 0.049 | 0.989 | 1.12 | 1.52 | 2 | 6 | 0 | 0 | 100% | 1 |
