PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 5FT8 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5FT8_PLP_A_501 | 64% | 7% | 0.163 | 0.961 | 3.46 | 1.39 | 3 | 4 | 0 | 0 | 100% | 0.9375 |
5FT8_PLP_G_501 | 58% | 8% | 0.173 | 0.952 | 2.68 | 1.98 | 3 | 6 | 0 | 0 | 100% | 0.9375 |
5FT8_PLP_C_501 | 55% | 10% | 0.19 | 0.96 | 3 | 1.42 | 3 | 3 | 0 | 0 | 100% | 0.9375 |
5FT8_PLP_M_501 | 55% | 9% | 0.161 | 0.929 | 3.2 | 1.34 | 3 | 3 | 0 | 0 | 100% | 0.9375 |
5FT8_PLP_I_501 | 53% | 10% | 0.192 | 0.956 | 3.15 | 1.23 | 3 | 2 | 0 | 0 | 100% | 0.9375 |
5FT8_PLP_E_501 | 53% | 11% | 0.203 | 0.967 | 2.91 | 1.35 | 3 | 2 | 0 | 0 | 100% | 0.9375 |
5FT8_PLP_K_501 | 52% | 11% | 0.193 | 0.952 | 3.09 | 1.2 | 3 | 2 | 0 | 0 | 100% | 0.9375 |
5FT8_PLP_O_501 | 23% | 8% | 0.227 | 0.851 | 3.35 | 1.34 | 3 | 2 | 0 | 0 | 100% | 0.9375 |
4LW2_PLP_B_501 | 94% | 12% | 0.094 | 0.993 | 2.24 | 1.82 | 3 | 4 | 0 | 0 | 100% | 0.9375 |
5FT6_PLP_A_1222 | 91% | 15% | 0.092 | 0.977 | 1.84 | 1.91 | 2 | 3 | 1 | 0 | 100% | 0.9375 |
4LW4_PLP_A_500 | 91% | 11% | 0.102 | 0.987 | 2.01 | 2.19 | 3 | 9 | 1 | 0 | 100% | 0.9375 |
5FT5_PLP_A_1410 | 86% | 17% | 0.102 | 0.972 | 1.8 | 1.82 | 2 | 2 | 1 | 0 | 100% | 0.9375 |
5FT4_PLP_B_1401 | 85% | 14% | 0.109 | 0.974 | 2.05 | 1.78 | 5 | 3 | 0 | 0 | 100% | 0.9375 |
2BIE_PLP_B_1361 | 100% | 28% | 0.039 | 0.989 | 1.48 | 1.39 | 4 | 3 | 1 | 0 | 100% | 0.9375 |
9J0V_PLP_A_301 | 100% | 36% | 0.037 | 0.987 | 0.82 | 1.68 | - | 5 | 0 | 0 | 100% | 0.9375 |
4NOG_PLP_A_501 | 100% | 38% | 0.042 | 0.992 | 1.24 | 1.18 | 3 | 1 | 0 | 0 | 100% | 1 |
3WQC_PLP_B_402 | 100% | 21% | 0.045 | 0.993 | 1.96 | 1.38 | 4 | 4 | 0 | 0 | 100% | 0.9375 |
4HT3_PLP_B_401 | 100% | 15% | 0.045 | 0.993 | 2.04 | 1.72 | 3 | 5 | 0 | 0 | 100% | 0.9375 |