5DXY | pdb_00005dxy


5J8: [[(2R,3S,4R,5R)-5-(5-aminocarbonyl-3,4-dihydro-2H-pyridin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2R,3R,4R,5R)-5-(6-aminopurin-9-yl)-3-oxidanyl-4-phosphonooxy-oxolan-2-yl]methyl hydrogen phosphate

5J8 is a Ligand Of Interest in 5DXY designated by the RCSB
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Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5DXY_5J8_A_402 98% 18% 0.048 0.9851.79 1.64 11 1300100%1
8QMX_5J8_B_402 74% 5% 0.097 0.933.42 1.94 19 1300100%0.83
8QNK_5J8_C_402 59% 2% 0.097 0.8764.3 2.75 30 1420100%0.92
8QO7_5J8_A_403 51% 7% 0.096 0.9282.84 1.85 9 100056%0.76
8QNY_5J8_A_402 46% 5% 0.091 0.9074.07 1.17 15 30054%0.82
8QNM_5J8_B_402 38% 4% 0.147 0.8483.95 1.64 23 1020100%0.82