UD1: URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
UD1 is a Ligand Of Interest in 5DEP designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5DEP_UD1_F_301 | 70% | 37% | 0.075 | 0.936 | 1.09 | 1.32 | 4 | 5 | 0 | 0 | 100% | 1 |
| 5DEP_UD1_B_302 | 61% | 37% | 0.087 | 0.917 | 1.02 | 1.38 | 3 | 6 | 0 | 0 | 100% | 1 |
| 5DEP_UD1_B_303 | 35% | 32% | 0.117 | 0.836 | 1.33 | 1.37 | 5 | 6 | 0 | 0 | 100% | 1 |
| 5DEP_UD1_F_302 | 33% | 25% | 0.122 | 0.836 | 1.23 | 1.84 | 4 | 9 | 0 | 0 | 100% | 1 |
| 5DEP_UD1_E_302 | 15% | 36% | 0.153 | 0.774 | 1.07 | 1.41 | 3 | 8 | 7 | 0 | 100% | 0.7 |
| 5DEP_UD1_D_302 | 13% | 38% | 0.161 | 0.764 | 1.15 | 1.24 | 5 | 5 | 0 | 0 | 100% | 0.7 |
| 3VCY_UD1_D_501 | 100% | 36% | 0.02 | 0.997 | 1.09 | 1.41 | 2 | 6 | 0 | 0 | 100% | 1 |
| 1HM9_UD1_A_1500 | 100% | 26% | 0.021 | 0.995 | 1.85 | 1.17 | 7 | 7 | 1 | 0 | 100% | 1 |
| 3BEO_UD1_A_372 | 100% | 25% | 0.022 | 0.996 | 1.03 | 2 | 4 | 17 | 1 | 1 | 100% | 1 |
| 5TZE_UD1_C_404 | 100% | 8% | 0.022 | 0.996 | 3.34 | 1.37 | 20 | 6 | 0 | 0 | 100% | 1 |
| 6BWC_UD1_D_401 | 100% | 28% | 0.022 | 0.996 | 1.24 | 1.68 | 5 | 10 | 0 | 0 | 100% | 1 |
