1RY: [[(2R,5S)-5-(4-azanyl-5-fluoranyl-2-oxidanylidene-pyrimidin-1-yl)-1,3-oxathiolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
1RY is a Ligand Of Interest in 5C52 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5C52_1RY_A_1301 | 54% | 1% | 0.12 | 0.882 | 3.8 | 3.23 | 10 | 15 | 3 | 1 | 100% | 1 |
| 5C51_1RY_A_4003 | 50% | 5% | 0.109 | 0.858 | 3.58 | 1.68 | 9 | 6 | 17 | 0 | 100% | 1 |
| 4K4I_1RY_A_601 | 98% | 15% | 0.049 | 0.984 | 2 | 1.69 | 8 | 8 | 0 | 0 | 100% | 1 |
| 5TB9_1RY_A_401 | 95% | 18% | 0.061 | 0.97 | 1.64 | 1.78 | 7 | 7 | 1 | 0 | 100% | 1 |
| 6UIR_1RY_A_601 | 85% | 14% | 0.077 | 0.946 | 2.12 | 1.67 | 9 | 9 | 0 | 0 | 100% | 1 |
| 5U2T_1RY_A_401 | 72% | 20% | 0.094 | 0.918 | 1.88 | 1.4 | 5 | 5 | 5 | 0 | 100% | 1 |
| 7LRY_1RY_A_606 | 57% | 46% | 0.083 | 0.856 | 0.52 | 1.43 | - | 3 | 2 | 0 | 100% | 1 |
