NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
NAP is a Ligand Of Interest in 5BP4 designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5BP4_NAP_J_3001 | 22% | 53% | 0.301 | 0.921 | 0.85 | 0.98 | 2 | 4 | 0 | 0 | 100% | 1 |
| 5BP4_NAP_K_3001 | 20% | 36% | 0.339 | 0.944 | 1.52 | 1.03 | 3 | 4 | 3 | 0 | 100% | 1 |
| 5BP4_NAP_P_3001 | 20% | 48% | 0.33 | 0.934 | 0.94 | 1.07 | 2 | 3 | 0 | 0 | 100% | 1 |
| 5BP4_NAP_D_3001 | 18% | 47% | 0.314 | 0.905 | 0.93 | 1.11 | 2 | 2 | 2 | 0 | 100% | 1 |
| 5BP4_NAP_G_3001 | 18% | 55% | 0.313 | 0.9 | 0.91 | 0.84 | 1 | 2 | 0 | 0 | 100% | 1 |
| 5BP4_NAP_C_3001 | 16% | 54% | 0.331 | 0.908 | 0.84 | 0.93 | 2 | 3 | 1 | 0 | 100% | 1 |
| 5BP4_NAP_B_3001 | 16% | 49% | 0.345 | 0.922 | 0.96 | 0.99 | 3 | 3 | 2 | 0 | 100% | 1 |
| 5BP4_NAP_A_3001 | 16% | 46% | 0.347 | 0.921 | 1.04 | 1.05 | 1 | 3 | 2 | 0 | 100% | 1 |
| 5BP4_NAP_O_3001 | 16% | 52% | 0.351 | 0.924 | 1.01 | 0.87 | 3 | 1 | 1 | 0 | 100% | 1 |
| 5BP4_NAP_N_3001 | 16% | 51% | 0.316 | 0.887 | 0.98 | 0.93 | 2 | 3 | 0 | 0 | 100% | 1 |
| 5BP4_NAP_R_3001 | 13% | 57% | 0.226 | 0.77 | 0.76 | 0.91 | 1 | 2 | 0 | 0 | 100% | 1 |
| 5BP4_NAP_H_3001 | 13% | 57% | 0.317 | 0.855 | 0.8 | 0.85 | 1 | 2 | 0 | 0 | 100% | 1 |
| 5BP4_NAP_L_3001 | 12% | 53% | 0.37 | 0.907 | 0.95 | 0.87 | 2 | 2 | 1 | 0 | 100% | 1 |
| 5BP4_NAP_I_3001 | 12% | 53% | 0.333 | 0.868 | 0.89 | 0.92 | 1 | 3 | 1 | 0 | 100% | 1 |
| 5BP4_NAP_M_3001 | 12% | 53% | 0.358 | 0.887 | 0.97 | 0.86 | 3 | 2 | 0 | 0 | 100% | 1 |
| 5BP4_NAP_F_3001 | 11% | 44% | 0.331 | 0.849 | 1.15 | 1.02 | 3 | 4 | 2 | 0 | 100% | 1 |
| 5BP4_NAP_E_3001 | 8% | 55% | 0.347 | 0.822 | 0.95 | 0.79 | 3 | 1 | 1 | 0 | 100% | 1 |
| 5BP4_NAP_G_3002 | 5% | 49% | 0.205 | 0.7 | 0.71 | 1.24 | - | 3 | 0 | 0 | 56% | 1 |
| 5BP4_NAP_B_3002 | 5% | 43% | 0.291 | 0.779 | 0.85 | 1.36 | - | 3 | 0 | 0 | 56% | 1 |
| 5BP4_NAP_C_3002 | 5% | 52% | 0.268 | 0.73 | 0.78 | 1.06 | - | 3 | 0 | 0 | 65% | 1 |
| 5BP4_NAP_K_3002 | 4% | 48% | 0.313 | 0.752 | 0.68 | 1.31 | - | 5 | 0 | 0 | 56% | 1 |
| 5BP4_NAP_D_3002 | 3% | 47% | 0.278 | 0.682 | 0.77 | 1.26 | - | 5 | 0 | 0 | 56% | 1 |
| 5BP4_NAP_P_3002 | 3% | 46% | 0.214 | 0.612 | 0.78 | 1.29 | - | 5 | 0 | 0 | 56% | 1 |
| 5BP4_NAP_F_3002 | 2% | 48% | 0.284 | 0.669 | 0.76 | 1.24 | - | 4 | 0 | 0 | 56% | 1 |
| 5BP4_NAP_J_3002 | 2% | 47% | 0.304 | 0.685 | 0.82 | 1.2 | - | 3 | 0 | 0 | 56% | 1 |
| 5BP4_NAP_A_3002 | 2% | 51% | 0.26 | 0.61 | 0.74 | 1.14 | - | 2 | 0 | 0 | 56% | 1 |
| 5BP4_NAP_H_3002 | 2% | 48% | 0.302 | 0.637 | 0.77 | 1.21 | - | 6 | 0 | 0 | 56% | 1 |
| 5BP4_NAP_N_3002 | 2% | 40% | 0.257 | 0.588 | 0.91 | 1.43 | 1 | 3 | 0 | 0 | 56% | 1 |
| 5BP4_NAP_Q_3001 | 1% | 53% | 0.395 | 0.61 | 0.98 | 0.86 | 2 | 3 | 0 | 0 | 100% | 1 |
| 5BP4_NAP_M_3002 | 1% | 46% | 0.282 | 0.544 | 0.94 | 1.14 | 1 | 3 | 0 | 0 | 56% | 1 |
| 2DBQ_NAP_A_401 | 100% | 24% | 0.017 | 0.998 | 1.42 | 1.71 | 7 | 16 | 0 | 0 | 100% | 1 |
| 2EXX_NAP_A_3698 | 100% | 10% | 0.025 | 0.996 | 1.63 | 2.7 | 7 | 18 | 9 | 0 | 100% | 1 |
| 6IJX_NAP_A_401 | 100% | 59% | 0.014 | 0.998 | 0.63 | 0.95 | 1 | 3 | 4 | 0 | 100% | 1 |
| 9FOB_NAP_A_401 | 100% | 56% | 0.023 | 0.996 | 0.78 | 0.91 | 2 | 3 | 1 | 0 | 100% | 1 |
| 9OOI_NAP_B_301 | 100% | 29% | 0.025 | 0.997 | 1.81 | 1.07 | 5 | 4 | 6 | 0 | 100% | 1 |
