UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 5BJY designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5BJY_UDP_B_701 | 98% | 33% | 0.05 | 0.983 | 1.09 | 1.44 | 1 | 5 | 0 | 0 | 100% | 1 |
| 5BJY_UDP_A_701 | 98% | 29% | 0.049 | 0.98 | 1.08 | 1.65 | 1 | 7 | 0 | 0 | 100% | 1 |
| 5BJX_UDP_A_701 | 99% | 30% | 0.04 | 0.988 | 1.24 | 1.45 | 4 | 5 | 1 | 0 | 100% | 1 |
| 5BJW_UDP_B_702 | 96% | 29% | 0.059 | 0.978 | 1.14 | 1.57 | 2 | 5 | 0 | 0 | 100% | 1 |
| 5BJU_UDP_A_701 | 92% | 31% | 0.065 | 0.961 | 0.94 | 1.66 | - | 7 | 0 | 0 | 100% | 1 |
| 5F87_UDP_A_501 | 100% | 29% | 0.013 | 0.999 | 1.18 | 1.54 | 2 | 4 | 2 | 0 | 100% | 1 |
| 5V0T_UDP_B_501 | 100% | 69% | 0.014 | 0.999 | 0.43 | 0.61 | - | 1 | 0 | 0 | 100% | 1 |
| 7FGA_UDP_D_401 | 100% | 2% | 0.014 | 0.999 | 3.6 | 2.79 | 15 | 12 | 2 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.5 | 2.77 | 14 | 14 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.51 | 2.73 | 14 | 12 | 2 | 0 | 100% | 1 |
