SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 5B5E designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5B5E_SQD_a_412 | 51% | 27% | 0.153 | 0.908 | 0.93 | 2.14 | 3 | 13 | 0 | 0 | 100% | 1 |
| 5B5E_SQD_A_410 | 45% | 28% | 0.167 | 0.899 | 0.99 | 2 | 3 | 17 | 0 | 0 | 100% | 1 |
| 5B5E_SQD_A_415 | 28% | 29% | 0.184 | 0.835 | 1.03 | 1.91 | 3 | 12 | 0 | 0 | 100% | 1 |
| 5B5E_SQD_a_417 | 27% | 39% | 0.169 | 0.814 | 1.1 | 1.35 | 5 | 4 | 0 | 0 | 100% | 1 |
| 5B5E_SQD_x_101 | 15% | 34% | 0.238 | 0.838 | 1.26 | 1.46 | 3 | 9 | 0 | 0 | 76% | 0.7593 |
| 5B5E_SQD_L_102 | 14% | 33% | 0.201 | 0.752 | 1.08 | 1.68 | 3 | 12 | 0 | 0 | 100% | 1 |
| 5B5E_SQD_D_408 | 12% | 21% | 0.287 | 0.85 | 1.22 | 2.21 | 4 | 13 | 0 | 0 | 83% | 0.8333 |
| 5B5E_SQD_B_621 | 6% | 35% | 0.239 | 0.675 | 1.03 | 1.6 | 3 | 7 | 0 | 0 | 100% | 1 |
| 5V2C_SQD_a_413 | 94% | 24% | 0.075 | 0.976 | 1.12 | 2.14 | 4 | 12 | 0 | 0 | 100% | 1 |
| 6DHE_SQD_A_412 | 77% | 23% | 0.113 | 0.961 | 1.05 | 2.27 | 5 | 14 | 0 | 0 | 96% | 0.963 |
| 8IRC_SQD_a_411 | 77% | 32% | 0.119 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 1 |
| 8IR5_SQD_a_411 | 75% | 33% | 0.123 | 0.958 | 0.95 | 1.77 | 3 | 13 | 0 | 0 | 100% | 1 |
| 8IRF_SQD_a_410 | 75% | 32% | 0.125 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 0.49 |
| 8IR8_SQD_a_409 | 75% | 33% | 0.126 | 0.96 | 0.95 | 1.77 | 3 | 13 | 0 | 0 | 100% | 0.4 |
