UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 4WMB designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4WMB_UDP_A_402 | 95% | 27% | 0.056 | 0.969 | 1.24 | 1.57 | 3 | 5 | 0 | 0 | 100% | 1 |
| 4WMI_UDP_A_402 | 99% | 24% | 0.036 | 0.988 | 1.13 | 1.84 | 3 | 8 | 2 | 0 | 100% | 1 |
| 4WN2_UDP_A_402 | 85% | 22% | 0.07 | 0.94 | 1.18 | 1.95 | 2 | 9 | 2 | 0 | 100% | 0.5 |
| 4WMK_UDP_A_402 | 81% | 26% | 0.081 | 0.937 | 1.18 | 1.71 | 3 | 5 | 3 | 0 | 100% | 1 |
| 4WLZ_UDP_A_402 | 76% | 30% | 0.088 | 0.927 | 1.17 | 1.51 | 3 | 4 | 0 | 0 | 100% | 1 |
| 5F87_UDP_A_501 | 100% | 29% | 0.013 | 0.999 | 1.18 | 1.54 | 2 | 4 | 2 | 0 | 100% | 1 |
| 5V0T_UDP_B_501 | 100% | 69% | 0.014 | 0.999 | 0.43 | 0.61 | - | 1 | 0 | 0 | 100% | 1 |
| 7FGA_UDP_D_401 | 100% | 2% | 0.014 | 0.999 | 3.6 | 2.79 | 15 | 12 | 2 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.5 | 2.77 | 14 | 14 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.51 | 2.73 | 14 | 12 | 2 | 0 | 100% | 1 |
