UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 4WMB designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4WMB_UDP_A_402 | 90% | 31% | 0.091 | 0.982 | 1.05 | 1.57 | 1 | 6 | 0 | 0 | 100% | 1 |
| 4WN2_UDP_A_402 | 82% | 22% | 0.088 | 0.949 | 1.14 | 1.97 | 3 | 10 | 2 | 0 | 100% | 1 |
| 4WMK_UDP_A_402 | 77% | 27% | 0.101 | 0.945 | 1.15 | 1.67 | 3 | 5 | 3 | 0 | 100% | 1 |
| 4WMI_UDP_A_402 | 75% | 26% | 0.104 | 0.939 | 1.08 | 1.81 | 3 | 8 | 2 | 0 | 100% | 1 |
| 4WLZ_UDP_A_402 | 45% | 31% | 0.198 | 0.932 | 1.09 | 1.54 | 2 | 5 | 0 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.3 | 2.73 | 13 | 14 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.31 | 2.68 | 13 | 13 | 2 | 0 | 100% | 1 |
| 8VH8_UDP_B_704 | 100% | 57% | 0.03 | 0.994 | 0.59 | 0.91 | - | 1 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 40% | 0.032 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
| 4GYW_UDP_C_1101 | 99% | 34% | 0.037 | 0.988 | 1.03 | 1.45 | 2 | 4 | 0 | 0 | 100% | 1 |
