D5M: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
D5M is a Ligand Of Interest in 4NS1 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4NS1_D5M_D_301 | 66% | 17% | 0.066 | 0.969 | 1.33 | 2.29 | 2 | 4 | 2 | 0 | 45% | 1 |
| 4NS1_D5M_A_301 | 65% | 19% | 0.07 | 0.968 | 1.29 | 2.12 | 2 | 2 | 1 | 0 | 45% | 1 |
| 4NS1_D5M_C_301 | 61% | 18% | 0.071 | 0.957 | 1.23 | 2.25 | 1 | 3 | 1 | 0 | 45% | 1 |
| 4NS1_D5M_B_301 | 49% | 19% | 0.099 | 0.942 | 1.33 | 2.13 | 1 | 3 | 1 | 0 | 45% | 1 |
| 4IOV_D5M_A_801 | 99% | 54% | 0.06 | 0.992 | 0.67 | 1.1 | - | 3 | 4 | 0 | 100% | 0.7 |
| 6B42_D5M_A_201 | 98% | 52% | 0.066 | 0.986 | 0.82 | 1.04 | 1 | 2 | 0 | 0 | 100% | 1 |
| 8HCG_D5M_A_306 | 95% | 32% | 0.078 | 0.982 | 1.69 | 1.02 | 7 | 1 | 0 | 0 | 100% | 1 |
| 8PUU_D5M_B_301 | 92% | 4% | 0.076 | 0.968 | 4.14 | 1.46 | 8 | 2 | 0 | 0 | 100% | 1 |
| 6JNL_D5M_C_101 | 89% | 60% | 0.09 | 0.977 | 0.72 | 0.82 | - | 1 | 0 | 0 | 95% | 1 |
