4MD1 | pdb_00004md1


L2P: 2,3-DI-PHYTANYL-GLYCEROL

L2P is a Ligand Of Interest in 4MD1 designated by the RCSB
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Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4MD1_L2P_A_1001 28% 70% 0.099 0.90.28 0.71 - -0017%1
4MD1_L2P_A_1008 27% 76% 0.112 0.9150.29 0.56 - -0015%1
4MD1_L2P_A_1016 24% 80% 0.113 0.9050.32 0.45 - -0011%1
4MD1_L2P_A_1007 22% 83% 0.105 0.8870.34 0.39 - -0011%1
4MD1_L2P_A_1003 21% 64% 0.123 0.8810.3 0.89 - -0020%1
4MD1_L2P_A_1013 21% 63% 0.125 0.8780.23 1 - 10022%1
4MD1_L2P_A_1006 17% 67% 0.131 0.8580.29 0.8 - -0022%1
4MD1_L2P_A_1010 17% 51% 0.136 0.8590.21 1.5 - 21022%1
4MD1_L2P_A_1014 17% 57% 0.141 0.8830.52 0.97 - -0011%1
4MD1_L2P_A_1009 15% 54% 0.138 0.8540.5 1.11 - -1015%1
4MD1_L2P_A_1015 12% 83% 0.128 0.830.32 0.41 - -0011%1
4MD1_L2P_A_1018 11% 58% 0.12 0.80.46 0.98 - -3015%1
4MD1_L2P_A_1017 11% 61% 0.157 0.8470.24 1.08 - -2011%1
4MD1_L2P_A_1004 10% 69% 0.123 0.7760.52 0.54 - -0020%1
4MD1_L2P_A_1005 8% 62% 0.153 0.7840.32 0.95 - -0017%1
4MD1_L2P_A_1011 7% 57% 0.167 0.7720.38 1.12 - 11024%1
4MD1_L2P_A_1012 6% 49% 0.163 0.730.69 1.16 - 14026%1
4MD1_L2P_A_1019 4% 51% 0.268 0.7870.5 1.27 - 35041%1
7XJD_L2P_A_302 92% 29% 0.079 0.9790.49 2.2 - 14215100%1
7XJC_L2P_A_302 82% 29% 0.102 0.9630.49 2.2 - 14335100%1
6GA3_L2P_A_311 55% 57% 0.157 0.9260.65 0.87 - 2160100%1
7XJE_L2P_A_303 50% 37% 0.13 0.9050.64 1.69 - 710187%1
6GAE_L2P_A_302 41% 57% 0.11 0.9080.64 0.86 - -8054%1
6GAA_L2P_A_302 41% 57% 0.113 0.9090.64 0.86 - -9054%1