UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 4II9 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
| 4II9_UDP_B_101 | 98% | 15% | 0.042 | 0.986 | 1.32 | 2.34 | 4 | 7 | 0 | 0 | 96% | 1 |
| 7Z5Z_UDP_A_402 | 100% | 78% | 0.032 | 0.993 | 0.33 | 0.48 | - | - | 0 | 0 | 96% | 1 |
| 7Z6A_UDP_A_402 | 92% | 81% | 0.065 | 0.968 | 0.32 | 0.44 | - | - | 0 | 0 | 96% | 1 |
| 7Z5Y_UDP_A_402 | 85% | 75% | 0.077 | 0.955 | 0.35 | 0.52 | - | - | 0 | 0 | 96% | 1 |
| 7Z6K_UDP_A_402 | 84% | 76% | 0.08 | 0.953 | 0.28 | 0.56 | - | - | 0 | 0 | 96% | 1 |
| 5F87_UDP_A_501 | 100% | 29% | 0.013 | 0.999 | 1.18 | 1.54 | 2 | 4 | 2 | 0 | 100% | 1 |
| 5V0T_UDP_B_501 | 100% | 69% | 0.014 | 0.999 | 0.43 | 0.61 | - | 1 | 0 | 0 | 100% | 1 |
| 7FGA_UDP_D_401 | 100% | 2% | 0.014 | 0.999 | 3.6 | 2.79 | 15 | 12 | 2 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.5 | 2.77 | 14 | 14 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.51 | 2.73 | 14 | 12 | 2 | 0 | 100% | 1 |