GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 4Z87 designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4Z87_GDP_D_602 | 86% | 26% | 0.073 | 0.947 | 1.18 | 1.72 | 4 | 5 | 3 | 0 | 100% | 1 |
| 4Z87_GDP_B_602 | 82% | 24% | 0.076 | 0.936 | 1.22 | 1.79 | 4 | 7 | 1 | 0 | 100% | 1 |
| 4Z87_GDP_C_603 | 82% | 24% | 0.078 | 0.938 | 1.25 | 1.73 | 3 | 6 | 1 | 0 | 100% | 1 |
| 4Z87_GDP_A_603 | 82% | 23% | 0.081 | 0.94 | 1.34 | 1.75 | 4 | 6 | 4 | 0 | 100% | 1 |
| 4Z87_GDP_A_602 | 79% | 23% | 0.083 | 0.931 | 1.22 | 1.82 | 5 | 9 | 0 | 0 | 100% | 1 |
| 4Z87_GDP_B_603 | 79% | 25% | 0.089 | 0.937 | 1.19 | 1.74 | 3 | 6 | 1 | 0 | 100% | 1 |
| 4Z87_GDP_D_601 | 66% | 23% | 0.091 | 0.895 | 1.18 | 1.89 | 4 | 8 | 1 | 0 | 100% | 1 |
| 4Z87_GDP_A_604 | 60% | 23% | 0.115 | 0.9 | 1.23 | 1.8 | 4 | 7 | 3 | 0 | 100% | 0.5 |
| 4Z87_GDP_C_602 | 55% | 22% | 0.106 | 0.872 | 1.27 | 1.82 | 4 | 7 | 0 | 0 | 100% | 1 |
| 4Z87_GDP_D_603 | 39% | 23% | 0.111 | 0.816 | 1.25 | 1.79 | 3 | 7 | 1 | 0 | 100% | 0.5 |
| 4Z87_GDP_B_604 | 39% | 24% | 0.125 | 0.828 | 1.19 | 1.81 | 4 | 7 | 1 | 0 | 100% | 1 |
| 4Z87_GDP_C_604 | 16% | 22% | 0.145 | 0.717 | 1.31 | 1.79 | 5 | 7 | 1 | 0 | 100% | 1 |
| 5TC3_GDP_A_602 | 99% | 15% | 0.038 | 0.988 | 1.99 | 1.73 | 9 | 12 | 1 | 0 | 100% | 1 |
| 6RPU_GDP_A_602 | 28% | 24% | 0.131 | 0.783 | 1.14 | 1.82 | 3 | 7 | 3 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 32% | 0.012 | 0.999 | 1.95 | 0.71 | 1 | 1 | 8 | 0 | 100% | 1 |
| 2CNW_GDP_A_1001 | 100% | 24% | 0.014 | 0.998 | 1.16 | 1.84 | 3 | 9 | 0 | 0 | 100% | 1 |
| 3ZY3_GDP_A_1384 | 100% | 26% | 0.014 | 0.998 | 1.13 | 1.74 | 3 | 8 | 1 | 0 | 100% | 1 |
| 5V9L_GDP_A_201 | 100% | 35% | 0.014 | 0.998 | 1.01 | 1.42 | 1 | 5 | 0 | 0 | 100% | 1 |
| 6EG8_GDP_K_401 | 100% | 25% | 0.015 | 0.999 | 1.16 | 1.76 | 3 | 7 | 0 | 0 | 100% | 1 |
