GDE: 3,4,5-trihydroxybenzoic acid
GDE is a Ligand Of Interest in 4Z5X designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4Z5X_GDE_A_901 | 17% | 47% | 0.214 | 0.788 | 0.87 | 1.18 | 1 | 1 | 0 | 0 | 100% | 1 |
| 7K4O_GDE_A_603 | 100% | 20% | 0.038 | 0.983 | 1.66 | 1.88 | 5 | 6 | 2 | 0 | 100% | 0.9708 |
| 3WR9_GDE_B_503 | 80% | 56% | 0.106 | 0.956 | 1.05 | 0.62 | - | - | 0 | 0 | 100% | 1 |
| 3WPM_GDE_B_502 | 74% | 23% | 0.125 | 0.955 | 2.35 | 1 | 1 | - | 2 | 0 | 100% | 1 |
| 3WR4_GDE_B_502 | 72% | 28% | 0.129 | 0.954 | 1.6 | 1.42 | 2 | 3 | 2 | 0 | 100% | 1 |
| 3WKU_GDE_A_502 | 72% | 54% | 0.147 | 0.971 | 0.92 | 0.86 | 1 | - | 2 | 0 | 100% | 1 |
