XYP: beta-D-xylopyranose
XYP is a Ligand Of Interest in 4XUQ designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
| 4XUQ_XYP_C_401 | 66% | 34% | 0.093 | 0.917 | 0.61 | 1.86 | - | 5 | 3 | 0 | 90% | 1 |
| 4XUQ_XYP_C_402 | 57% | 41% | 0.11 | 0.884 | 1.17 | 1.02 | 1 | - | 3 | 0 | 100% | 1 |
| 4XUQ_XYP_A_1001 | 46% | 27% | 0.116 | 0.869 | 0.65 | 2.16 | - | 4 | 4 | 0 | 90% | 1 |
| 4XUQ_XYP_B_402 | 46% | 48% | 0.119 | 0.852 | 0.91 | 1 | 1 | 1 | 3 | 0 | 100% | 1 |
| 4XUQ_XYP_B_401 | 33% | 43% | 0.124 | 0.82 | 0.71 | 1.37 | - | 2 | 3 | 0 | 90% | 1 |
| 4XUR_XYP_B_1003 | 97% | 38% | 0.039 | 0.983 | 0.92 | 1.38 | - | 2 | 0 | 0 | 90% | 1 |
| 4PMY_XYP_A_401 | 100% | 73% | 0.017 | 0.996 | 0.47 | 0.45 | - | - | 0 | 0 | 100% | 1 |
| 1OD8_XYP_A_1311 | 100% | 64% | 0.027 | 0.992 | 0.69 | 0.55 | - | - | 0 | 0 | 100% | 1 |
| 3FYU_XYP_C_1001 | 100% | 48% | 0.033 | 0.993 | 1.11 | 0.8 | - | - | 0 | 0 | 100% | 1 |
| 5L6G_XYP_A_510 | 100% | 65% | 0.033 | 0.988 | 0.42 | 0.77 | - | - | 0 | 0 | 100% | 1 |
| 1W9T_XYP_B_1148 | 100% | 20% | 0.022 | 0.994 | 1.19 | 2.06 | 1 | 5 | 6 | 0 | 90% | 1 |