SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 4V82 designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4V82_SQD_AA_413 | 11% | 5% | 0.308 | 0.843 | 2.41 | 2.82 | 25 | 20 | 0 | 0 | 94% | 1 |
| 4V82_SQD_AA_416 | 6% | 5% | 0.336 | 0.76 | 2.43 | 2.79 | 28 | 21 | 2 | 0 | 100% | 1 |
| 4V82_SQD_AB_627 | 4% | 5% | 0.365 | 0.767 | 2.48 | 2.71 | 22 | 15 | 4 | 0 | 87% | 1 |
| 4V82_SQD_BA_5414 | 3% | 5% | 0.362 | 0.732 | 2.49 | 2.79 | 26 | 20 | 0 | 0 | 94% | 1 |
| 4V82_SQD_BB_5601 | 3% | 5% | 0.39 | 0.73 | 2.47 | 2.71 | 22 | 16 | 6 | 0 | 87% | 1 |
| 4V82_SQD_AF_102 | 2% | 5% | 0.452 | 0.743 | 2.52 | 2.95 | 20 | 17 | 1 | 0 | 83% | 1 |
| 4V82_SQD_AB_622 | 1% | 5% | 0.425 | 0.656 | 2.58 | 2.84 | 19 | 15 | 6 | 0 | 80% | 1 |
| 4V82_SQD_BA_5401 | 1% | 5% | 0.473 | 0.652 | 2.46 | 2.78 | 28 | 21 | 3 | 0 | 100% | 1 |
| 4V82_SQD_BB_5625 | 1% | 5% | 0.471 | 0.593 | 2.6 | 2.86 | 20 | 15 | 6 | 0 | 80% | 1 |
| 4V82_SQD_BF_5102 | 1% | 4% | 0.565 | 0.677 | 2.52 | 2.96 | 19 | 19 | 1 | 0 | 83% | 1 |
| 5V2C_SQD_a_413 | 94% | 21% | 0.075 | 0.976 | 1.12 | 2.14 | 4 | 12 | 0 | 0 | 100% | 1 |
| 5GTI_SQD_A_409 | 91% | 29% | 0.066 | 0.95 | 0.98 | 1.84 | 3 | 13 | 0 | 0 | 100% | 1 |
| 5WS6_SQD_A_411 | 87% | 32% | 0.084 | 0.954 | 0.88 | 1.78 | 2 | 12 | 0 | 0 | 100% | 1 |
| 6JLJ_SQD_a_414 | 85% | 35% | 0.081 | 0.944 | 0.97 | 1.59 | 3 | 13 | 2 | 0 | 100% | 1 |
| 6JLO_SQD_a_413 | 81% | 36% | 0.083 | 0.934 | 0.96 | 1.56 | 3 | 12 | 2 | 0 | 100% | 1 |
| 6JLM_SQD_a_410 | 80% | 33% | 0.085 | 0.933 | 0.98 | 1.64 | 3 | 11 | 7 | 0 | 100% | 1 |














