GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 4V5G designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4V5G_GDP_AZ_501 | 65% | 28% | 0.09 | 0.892 | 1.08 | 1.69 | 3 | 8 | 15 | 0 | 100% | 1 |
| 4V5G_GDP_CZ_501 | 65% | 26% | 0.082 | 0.883 | 1.08 | 1.8 | 2 | 10 | 15 | 0 | 100% | 1 |
| 1TUI_GDP_C_407 | 100% | 21% | 0.021 | 0.997 | 1.48 | 1.71 | 1 | 6 | 3 | 0 | 100% | 1 |
| 1HA3_GDP_A_406 | 99% | 58% | 0.044 | 0.983 | 0.85 | 0.64 | 1 | 1 | 1 | 0 | 100% | 1 |
| 4V8Q_GDP_BZ_1003 | 87% | 28% | 0.083 | 0.962 | 1.1 | 1.65 | 3 | 7 | 3 | 0 | 100% | 1 |
| 4V5R_GDP_CZ_501 | 56% | 26% | 0.115 | 0.885 | 1.06 | 1.8 | 2 | 6 | 8 | 0 | 100% | 1 |
| 4V5S_GDP_AZ_501 | 51% | 15% | 0.106 | 0.856 | 1.52 | 2.12 | 3 | 11 | 9 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 32% | 0.012 | 0.999 | 1.95 | 0.71 | 1 | 1 | 8 | 0 | 100% | 1 |
| 2CNW_GDP_A_1001 | 100% | 24% | 0.014 | 0.998 | 1.16 | 1.84 | 3 | 9 | 0 | 0 | 100% | 1 |
| 3ZY3_GDP_A_1384 | 100% | 26% | 0.014 | 0.998 | 1.13 | 1.74 | 3 | 8 | 1 | 0 | 100% | 1 |
| 5V9L_GDP_A_201 | 100% | 35% | 0.014 | 0.998 | 1.01 | 1.42 | 1 | 5 | 0 | 0 | 100% | 1 |
| 6EG8_GDP_K_401 | 100% | 25% | 0.015 | 0.999 | 1.16 | 1.76 | 3 | 7 | 0 | 0 | 100% | 1 |
