Ligand validation:4UB8

DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)

DGD is a Ligand Of Interest in 4UB8 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4UB8_DGD_C_517	60%	51%	0.141	0.937	0.85	1.06	2	4	0	0	94%	0.9394
4UB8_DGD_c_517	48%	50%	0.173	0.929	0.84	1.09	2	6	0	0	94%	0.9394
4UB8_DGD_c_519	37%	52%	0.204	0.915	0.89	0.97	2	3	0	0	94%	0.9394
4UB8_DGD_c_518	37%	51%	0.193	0.902	0.9	0.98	2	3	0	0	94%	0.9394
4UB8_DGD_h_102	35%	51%	0.172	0.873	0.9	1	3	7	0	0	94%	0.9394
4UB8_DGD_C_519	34%	55%	0.232	0.93	0.82	0.89	2	3	0	0	94%	0.9394
4UB8_DGD_C_518	31%	51%	0.235	0.915	0.89	1.02	2	5	0	0	94%	0.9394
4UB8_DGD_H_102	29%	53%	0.194	0.862	0.93	0.9	3	3	0	0	94%	0.9394
4UB8_DGD_d_407	1%	49%	0.439	0.59	0.94	1.04	3	6	0	0	94%	0.9394
4UB8_DGD_D_407	0%	43%	0.489	0.508	0.96	1.3	4	9	0	0	94%	0.9394
5V2C_DGD_C_516	95%	44%	0.067	0.983	0.89	1.29	5	10	0	0	94%	0.9394
7YQ7_DGD_C_518	87%	51%	0.084	0.967	0.83	1.07	3	5	0	0	94%	0.9394
8IR5_DGD_C_515	85%	48%	0.092	0.97	0.81	1.21	2	8	0	0	94%	0.9394
8IRC_DGD_C_517	85%	48%	0.096	0.973	0.83	1.2	2	8	0	0	94%	0.9394
5ZZN_DGD_c_517	85%	46%	0.09	0.966	1.05	1.06	3	5	0	0	94%	0.9394
7RF1_DGD_c_519	85%	36%	0.093	0.968	1.16	1.45	6	11	0	0	94%	0.9394

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.