UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 4Q1B designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4Q1B_UDP_B_302 | 91% | 35% | 0.085 | 0.972 | 1.04 | 1.6 | 2 | 6 | 2 | 0 | 100% | 1 |
| 4Q1B_UDP_A_302 | 89% | 30% | 0.093 | 0.973 | 1.04 | 1.84 | 2 | 8 | 0 | 0 | 100% | 1 |
| 2ZI6_UDP_A_4301 | 97% | 28% | 0.071 | 0.989 | 1.16 | 1.84 | 1 | 8 | 1 | 0 | 100% | 1 |
| 7ZIA_UDP_A_301 | 96% | 32% | 0.077 | 0.988 | 1.15 | 1.65 | 3 | 6 | 0 | 0 | 100% | 1 |
| 2ZIA_UDP_B_301 | 96% | 30% | 0.075 | 0.984 | 1.18 | 1.72 | 4 | 7 | 0 | 0 | 100% | 1 |
| 4Q1E_UDP_B_303 | 96% | 36% | 0.078 | 0.985 | 1.14 | 1.46 | 3 | 4 | 1 | 0 | 100% | 1 |
| 2ZI5_UDP_B_2301 | 95% | 24% | 0.081 | 0.984 | 1.12 | 2.11 | 1 | 7 | 0 | 0 | 100% | 1 |
| 4PHR_UDP_A_301 | 100% | 43% | 0.042 | 0.989 | 0.84 | 1.41 | - | 4 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 47% | 0.046 | 0.992 | 1.19 | 0.9 | 2 | 1 | 0 | 0 | 100% | 1 |
| 1GX4_UDP_A_401 | 100% | 20% | 0.046 | 0.991 | 2.39 | 1.19 | 4 | 3 | 0 | 0 | 100% | 1 |
| 5GY7_UDP_B_401 | 99% | 45% | 0.047 | 0.987 | 0.98 | 1.18 | 1 | 5 | 0 | 0 | 100% | 1 |
| 3U2V_UDP_B_270 | 99% | 35% | 0.049 | 0.989 | 1.12 | 1.52 | 2 | 6 | 0 | 0 | 100% | 1 |
