UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 4FRE designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4FRE_UDP_A_401 | 1% | 20% | 0.458 | 0.53 | 1.98 | 1.6 | 6 | 9 | 0 | 0 | 100% | 0.676 |
| 6GX2_UDP_A_402 | 99% | 52% | 0.053 | 0.989 | 0.86 | 1.01 | - | 2 | 0 | 0 | 100% | 1 |
| 5M7C_UDP_B_602 | 99% | 36% | 0.053 | 0.984 | 1.11 | 1.49 | - | 6 | 0 | 0 | 100% | 1 |
| 3V0Q_UDP_B_402 | 96% | 40% | 0.07 | 0.979 | 0.96 | 1.44 | 1 | 6 | 0 | 0 | 100% | 1 |
| 5M7B_UDP_A_602 | 95% | 43% | 0.077 | 0.98 | 1 | 1.27 | 1 | 5 | 0 | 0 | 100% | 1 |
| 2RJ8_UDP_A_1 | 86% | 32% | 0.083 | 0.951 | 1.28 | 1.53 | 3 | 6 | 0 | 0 | 100% | 1 |
| 4PHR_UDP_A_301 | 100% | 43% | 0.042 | 0.989 | 0.84 | 1.41 | - | 4 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 47% | 0.046 | 0.992 | 1.19 | 0.9 | 2 | 1 | 0 | 0 | 100% | 1 |
| 1GX4_UDP_A_401 | 100% | 20% | 0.046 | 0.991 | 2.39 | 1.19 | 4 | 3 | 0 | 0 | 100% | 1 |
| 5GY7_UDP_B_401 | 99% | 45% | 0.047 | 0.987 | 0.98 | 1.18 | 1 | 5 | 0 | 0 | 100% | 1 |
| 3U2V_UDP_B_270 | 99% | 35% | 0.049 | 0.989 | 1.12 | 1.52 | 2 | 6 | 0 | 0 | 100% | 1 |
