GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 4C7O designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4C7O_GDP_B_1003 | 73% | 42% | 0.162 | 0.989 | 0.95 | 1.31 | 1 | 4 | 2 | 0 | 100% | 1 |
| 4C7O_GDP_C_1003 | 73% | 32% | 0.167 | 0.994 | 0.94 | 1.72 | 1 | 9 | 0 | 0 | 100% | 1 |
| 4C7O_GDP_A_1003 | 72% | 39% | 0.167 | 0.993 | 0.92 | 1.44 | 1 | 5 | 0 | 0 | 100% | 1 |
| 4C7O_GDP_D_1003 | 68% | 43% | 0.179 | 0.993 | 1 | 1.22 | 2 | 3 | 0 | 0 | 100% | 1 |
| 4C7O_GDP_D_1306 | 68% | 41% | 0.139 | 0.951 | 1.03 | 1.25 | 2 | 4 | 0 | 0 | 100% | 1 |
| 6FQD_GDP_A_502 | 81% | 5% | 0.116 | 0.968 | 3.9 | 1.62 | 12 | 7 | 2 | 0 | 100% | 1 |
| 6NC4_GDP_B_501 | 50% | 9% | 0.146 | 0.897 | 1.92 | 2.52 | 7 | 12 | 0 | 0 | 100% | 1 |
| 6NC1_GDP_A_501 | 9% | 17% | 0.264 | 0.747 | 1.89 | 1.73 | 4 | 8 | 1 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3K_GDP_A_201 | 100% | 39% | 0.016 | 0.998 | 1.17 | 1.21 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3L_GDP_A_201 | 100% | 49% | 0.021 | 0.997 | 0.91 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 38% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
