L3P: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE
L3P is a Ligand Of Interest in 3VVK designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3VVK_L3P_D_302 | 4% | 21% | 0.216 | 0.741 | 2.05 | 1.19 | 9 | 3 | 0 | 0 | 34% | 1 |
| 3VVK_L3P_C_303 | 3% | 21% | 0.26 | 0.73 | 1.99 | 1.22 | 8 | 3 | 1 | 0 | 34% | 1 |
| 3VVK_L3P_E_303 | 3% | 21% | 0.249 | 0.712 | 2.06 | 1.21 | 8 | 2 | 3 | 0 | 34% | 1 |
| 3VVK_L3P_C_304 | 0% | 19% | 0.367 | 0.479 | 1.97 | 1.4 | 8 | 3 | 10 | 0 | 34% | 1 |
| 3ABW_L3P_D_314 | 2% | 22% | 0.27 | 0.718 | 2 | 1.19 | 8 | 2 | 4 | 0 | 34% | 1 |
| 3A7K_L3P_D_330 | 2% | 22% | 0.191 | 0.611 | 2.02 | 1.16 | 8 | 1 | 0 | 0 | 34% | 1 |
| 5B0W_L3P_B_302 | 1% | 18% | 0.287 | 0.662 | 2.01 | 1.41 | 8 | 4 | 1 | 0 | 34% | 1 |
| 5ETZ_L3P_A_304 | 1% | 21% | 0.428 | 0.671 | 2 | 1.21 | 8 | 3 | 1 | 0 | 34% | 1 |
| 1X0S_L3P_A_280 | 15% | 23% | 0.14 | 0.762 | 2.02 | 1.09 | 13 | 2 | 0 | 0 | 68% | 1 |
| 1UCQ_L3P_A_280 | 6% | 23% | 0.218 | 0.717 | 1.98 | 1.11 | 12 | 3 | 0 | 0 | 68% | 1 |
| 3WQJ_L3P_A_305 | 5% | 82% | 0.173 | 0.717 | 0.24 | 0.5 | - | - | 0 | 0 | 34% | 1 |
| 1X0K_L3P_1_260 | 5% | 32% | 0.241 | 0.678 | 1.31 | 1.28 | 6 | 7 | 6 | 0 | 85% | 0.96 |
| 2ZFE_L3P_A_260 | 4% | 35% | 0.252 | 0.639 | 1.24 | 1.21 | 8 | 6 | 5 | 0 | 100% | 0.89 |
