RET: RETINAL
RET is a Ligand Of Interest in 3VVK designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
| 3VVK_RET_A_301 | 78% | 10% | 0.09 | 0.936 | 2.63 | 1.62 | 6 | 6 | 0 | 0 | 100% | 0.52 |
| 3VVK_RET_D_301 | 73% | 9% | 0.103 | 0.932 | 2.72 | 1.64 | 6 | 8 | 0 | 0 | 100% | 0.44 |
| 3VVK_RET_B_301 | 65% | 15% | 0.105 | 0.907 | 1.71 | 1.97 | 4 | 11 | 0 | 0 | 100% | 0.64 |
| 3VVK_RET_C_301 | 60% | 13% | 0.11 | 0.894 | 1.68 | 2.12 | 4 | 10 | 0 | 0 | 100% | 0.56 |
| 3VVK_RET_E_301 | 56% | 9% | 0.135 | 0.909 | 2.82 | 1.55 | 6 | 7 | 0 | 0 | 100% | 0.44 |
| 3VVK_RET_F_301 | 44% | 10% | 0.131 | 0.858 | 2.86 | 1.45 | 6 | 5 | 1 | 0 | 100% | 0.44 |
| 3A7K_RET_B_292 | 90% | 11% | 0.064 | 0.951 | 2.37 | 1.76 | 5 | 7 | 2 | 0 | 100% | 1 |
| 4QRY_RET_A_301 | 89% | 12% | 0.062 | 0.947 | 2.34 | 1.68 | 6 | 8 | 1 | 0 | 100% | 0.5 |
| 3QBL_RET_B_292 | 87% | 12% | 0.074 | 0.952 | 2.22 | 1.8 | 5 | 8 | 2 | 0 | 100% | 1 |
| 3QBK_RET_B_292 | 87% | 12% | 0.069 | 0.944 | 2.42 | 1.62 | 5 | 7 | 2 | 0 | 100% | 1 |
| 5B0W_RET_E_302 | 84% | 14% | 0.067 | 0.933 | 2.18 | 1.62 | 6 | 5 | 0 | 0 | 100% | 0.65 |
| 3AYM_RET_A_1000 | 100% | 15% | 0.029 | 0.996 | 1.92 | 1.77 | 2 | 8 | 1 | 0 | 100% | 1 |
| 4OV0_RET_A_301 | 100% | 7% | 0.027 | 0.992 | 0.76 | 3.77 | - | 15 | 8 | 0 | 100% | 1 |
| 7XJE_RET_A_301 | 100% | 5% | 0.028 | 0.993 | 2.13 | 3.07 | 3 | 14 | 3 | 0 | 100% | 1 |
| 3UTY_RET_A_301 | 100% | 5% | 0.028 | 0.992 | 2.48 | 2.7 | 6 | 12 | 2 | 0 | 100% | 1 |
| 7XJC_RET_A_301 | 100% | 8% | 0.028 | 0.992 | 2.1 | 2.46 | 2 | 15 | 2 | 0 | 100% | 0.5 |