D5M: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE

D5M is a Ligand Of Interest in 3KIC designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3KIC_D5M_J_999 51% 42% 0.191 0.9450.92 1.3 1 310100%0.7
3KIC_D5M_P_999 45% 43% 0.191 0.9240.91 1.3 1 210100%0.7
3KIC_D5M_C_999 44% 43% 0.216 0.9450.91 1.3 1 320100%0.7
3KIC_D5M_Q_999 42% 42% 0.219 0.9410.91 1.31 1 310100%0.7
3KIC_D5M_K_999 42% 43% 0.194 0.9150.91 1.3 1 220100%0.7
3KIC_D5M_A_999 40% 43% 0.228 0.9420.91 1.3 1 310100%0.7
3KIC_D5M_S_999 40% 43% 0.22 0.9320.9 1.31 1 310100%0.7
3KIC_D5M_G_999 37% 43% 0.233 0.9330.91 1.3 1 220100%0.7
3KIC_D5M_I_999 37% 43% 0.231 0.9290.91 1.3 1 210100%0.7
3KIC_D5M_H_999 34% 43% 0.246 0.9330.91 1.3 1 320100%0.7
3KIC_D5M_O_999 34% 43% 0.257 0.9440.91 1.3 1 320100%0.7
3KIC_D5M_B_999 33% 42% 0.249 0.9310.91 1.31 1 220100%0.7
3KIC_D5M_R_999 33% 43% 0.247 0.9250.91 1.3 1 210100%0.7
3KIC_D5M_L_999 32% 42% 0.265 0.940.91 1.31 1 320100%0.7
3KIC_D5M_F_999 31% 43% 0.257 0.930.91 1.3 1 220100%0.7
3KIC_D5M_D_999 31% 42% 0.233 0.9050.92 1.3 1 220100%0.7
3KIC_D5M_T_999 23% 42% 0.3 0.9240.91 1.31 1 320100%0.7
3KIC_D5M_N_999 22% 42% 0.279 0.8990.91 1.31 1 320100%0.7
3KIC_D5M_M_999 22% 42% 0.313 0.9330.91 1.31 1 320100%0.7
3KIC_D5M_E_999 15% 42% 0.299 0.8660.92 1.3 1 220100%0.7
3KIE_D5M_T_999 20% 46% 0.29 0.8930.93 1.15 2 230100%0.73
6B42_D5M_A_201 98% 52% 0.066 0.9860.82 1.04 1 200100%1
8HCG_D5M_A_306 95% 32% 0.078 0.9821.69 1.02 7 100100%1
6JNL_D5M_C_101 89% 60% 0.09 0.9770.72 0.82 - 10095%0.9545
2IOC_D5M_B_303 85% 12% 0.091 0.9552.71 1.35 3 200100%1
6CGN_D5M_A_801 83% 59% 0.106 0.9640.72 0.86 - 200100%1