Ligand validation:3GJD

BOG: octyl beta-D-glucopyranoside

BOG is a Ligand Of Interest in 3GJD designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
3GJD_BOG_A_703	33%	47%	0.218	0.895	0.72	1.32	-	3	3	0	100%	1
3GJD_BOG_A_705	12%	45%	0.259	0.786	0.73	1.43	-	4	4	0	100%	1
3GJD_BOG_A_701	9%	48%	0.26	0.756	0.73	1.29	-	3	2	0	100%	1
3GJD_BOG_A_704	7%	45%	0.292	0.754	0.69	1.46	-	4	4	0	100%	1
3GJD_BOG_A_702	6%	47%	0.325	0.757	0.71	1.36	-	3	1	0	100%	1
3GJD_BOG_A_706	5%	77%	0.262	0.777	0.29	0.6	-	-	1	0	45%	0.45
4MMC_BOG_A_606	55%	35%	0.128	0.895	1.3	1.34	3	3	2	0	100%	1
4MMD_BOG_A_604	48%	46%	0.18	0.923	0.59	1.49	-	2	4	0	100%	1
4MMF_BOG_B_605	47%	62%	0.214	0.956	0.5	0.94	-	2	1	0	100%	1
3F3A_BOG_A_703	47%	52%	0.171	0.909	0.59	1.26	-	3	1	1	100%	1
3F4I_BOG_A_703	46%	77%	0.158	0.893	0.44	0.48	-	-	1	0	100%	1
4KRG_BOG_A_503	99%	54%	0.048	0.981	1.08	0.68	2	-	1	0	100%	1
5B5S_BOG_A_301	96%	46%	0.065	0.973	0.92	1.19	1	1	0	0	100%	1
7VL5_BOG_A_801	93%	64%	0.072	0.967	0.73	0.63	-	-	0	0	100%	1
3OEF_BOG_X_1000	87%	51%	0.071	0.944	1.24	0.65	2	-	0	0	100%	1
4PH9_BOG_A_603	86%	47%	0.087	0.957	0.9	1.16	1	1	1	0	100%	1

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.