GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 3VQT designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3VQT_GDP_D_601 | 99% | 41% | 0.057 | 0.989 | 0.85 | 1.43 | - | 6 | 0 | 0 | 100% | 1 |
| 3VQT_GDP_A_601 | 98% | 39% | 0.061 | 0.981 | 0.79 | 1.56 | - | 5 | 0 | 0 | 100% | 1 |
| 3VQT_GDP_B_601 | 91% | 40% | 0.088 | 0.975 | 0.92 | 1.4 | 2 | 5 | 1 | 0 | 100% | 1 |
| 3VQT_GDP_C_601 | 91% | 29% | 0.086 | 0.971 | 1.22 | 1.6 | 3 | 6 | 0 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3K_GDP_A_201 | 100% | 39% | 0.016 | 0.998 | 1.17 | 1.21 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3L_GDP_A_201 | 100% | 49% | 0.021 | 0.997 | 0.91 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 38% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
| 9C3Z_GDP_A_202 | 100% | 36% | 0.016 | 0.998 | 1.18 | 1.33 | 2 | 3 | 0 | 0 | 100% | 1 |
