GDU: GALACTOSE-URIDINE-5'-DIPHOSPHATE

GDU is a Ligand Of Interest in 3UKH designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3UKH_GDU_C_521 4% 15% 0.465 0.8491.94 1.81 11 1070100%0.55
3UKH_GDU_G_521 3% 15% 0.406 0.7321.92 1.85 11 1170100%0.56
3UKH_GDU_H_521 2% 15% 0.571 0.8161.96 1.84 10 10100100%0.57
3UKH_GDU_D_521 1% 15% 0.534 0.6691.93 1.87 11 1140100%0.51
3UKH_GDU_B_521 0% 15% 0.582 0.6411.94 1.84 11 10100100%0.49
3UKH_GDU_E_521 0% 13% 0.578 0.6221.91 2.03 10 15100100%0.45
3UKH_GDU_A_521 0% 15% 0.668 0.6651.92 1.84 10 11100100%0.49
3UKH_GDU_F_521 0% 15% 0.711 0.548 1.92 1.85 11 1030100%0.51
3UKF_GDU_A_802 68% 23% 0.156 0.9671.76 1.45 9 720100%1
3UKP_GDU_D_602 65% 13% 0.151 0.9532.03 1.96 9 1530100%1
3UTH_GDU_A_514 57% 18% 0.172 0.9491.73 1.8 10 1560100%0.76
3UKQ_GDU_A_602 23% 14% 0.253 0.8781.87 1.95 11 1410100%1
4HO9_GDU_B_300 99% 24% 0.05 0.9831.38 1.71 4 900100%1
6GX0_GDU_A_402 97% 47% 0.067 0.980.81 1.22 1 600100%0.6
5M7D_GDU_A_402 97% 44% 0.071 0.9830.91 1.26 1 600100%1
7YS9_GDU_A_404 91% 78% 0.087 0.9740.39 0.51 - 110100%0.4
4LW3_GDU_A_402 89% 11% 0.104 0.9832.67 1.52 15 1000100%1