Ligand validation:3QD6

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 3QD6 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
3QD6_NAG_B_1411	41%	59%	0.165	0.882	0.78	0.75	1	-	2	0	100%	0.9333
3QD6_NAG_A_1411	29%	55%	0.228	0.886	0.74	0.98	1	1	0	0	100%	0.9333
3QD6_NAG_D_1411	21%	57%	0.227	0.835	0.89	0.74	1	-	0	0	100%	0.9333
3QD6_NAG_F_1411	6%	53%	0.332	0.758	1.03	0.78	1	-	3	0	100%	0.9333
3QD6_NAG_E_1411	6%	42%	0.344	0.77	0.9	1.41	1	3	1	0	100%	0.9333
3QD6_NAG_C_1411	2%	56%	0.487	0.728	0.77	0.9	-	1	1	0	100%	0.9333
3LKJ_NAG_A_2	50%	32%	0.157	0.907	0.53	2.24	-	6	1	0	100%	0.9333
7SGM_NAG_C_301	24%	30%	0.211	0.841	0.82	2.1	-	3	0	0	100%	0.9333
1OC7_NAG_A_500	100%	60%	0.04	0.991	0.61	0.9	-	1	0	0	100%	0.9333
1OC6_NAG_A_500	100%	67%	0.041	0.988	0.46	0.8	-	1	0	0	100%	0.9333
1UWC_NAG_A_262	100%	54%	0.046	0.99	0.81	0.95	-	-	0	0	100%	0.9333
6ZE6_NAG_B_703	99%	52%	0.044	0.984	0.78	1.07	-	2	0	0	100%	0.8667
6ZE2_NAG_B_704	99%	56%	0.042	0.979	0.73	0.95	-	1	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.