GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 3QBV designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3QBV_GDP_C_200 | 66% | 24% | 0.12 | 0.926 | 1.22 | 1.79 | 3 | 7 | 0 | 0 | 100% | 1 |
| 3QBV_GDP_A_200 | 62% | 25% | 0.122 | 0.915 | 1.21 | 1.73 | 3 | 5 | 1 | 0 | 100% | 1 |
| 4ITR_GDP_C_202 | 97% | 26% | 0.054 | 0.98 | 1.16 | 1.74 | 3 | 5 | 0 | 0 | 100% | 1 |
| 5C2J_GDP_B_501 | 97% | 29% | 0.053 | 0.976 | 1.08 | 1.66 | 1 | 9 | 1 | 0 | 100% | 1 |
| 4DID_GDP_A_200 | 97% | 26% | 0.059 | 0.98 | 1.22 | 1.67 | 4 | 6 | 1 | 0 | 100% | 1 |
| 1A4R_GDP_A_200 | 96% | 38% | 0.059 | 0.977 | 1.42 | 0.93 | 3 | 2 | 0 | 0 | 100% | 1 |
| 7S0Y_GDP_B_201 | 95% | 27% | 0.053 | 0.964 | 1.25 | 1.57 | 5 | 7 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 32% | 0.012 | 0.999 | 1.95 | 0.71 | 1 | 1 | 8 | 0 | 100% | 1 |
| 2CNW_GDP_A_1001 | 100% | 24% | 0.014 | 0.998 | 1.16 | 1.84 | 3 | 9 | 0 | 0 | 100% | 1 |
| 3ZY3_GDP_A_1384 | 100% | 26% | 0.014 | 0.998 | 1.13 | 1.74 | 3 | 8 | 1 | 0 | 100% | 1 |
| 5V9L_GDP_A_201 | 100% | 35% | 0.014 | 0.998 | 1.01 | 1.42 | 1 | 5 | 0 | 0 | 100% | 1 |
| 6EG8_GDP_K_401 | 100% | 25% | 0.015 | 0.999 | 1.16 | 1.76 | 3 | 7 | 0 | 0 | 100% | 1 |
