CDP: CYTIDINE-5'-DIPHOSPHATE
CDP is a Ligand Of Interest in 3Q89 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3Q89_CDP_B_158 | 74% | 18% | 0.126 | 0.958 | 2.07 | 1.65 | 9 | 8 | 1 | 0 | 100% | 1 |
3Q89_CDP_E_158 | 28% | 30% | 0.222 | 0.877 | 1.38 | 1.55 | 4 | 7 | 2 | 0 | 100% | 1 |
3BOS_CDP_B_300 | 100% | 55% | 0.046 | 0.988 | 0.92 | 0.81 | 1 | 1 | 0 | 0 | 100% | 1 |
2VBU_CDP_A_1133 | 96% | 46% | 0.078 | 0.989 | 0.89 | 1.22 | - | 3 | 0 | 0 | 100% | 1 |
1ORR_CDP_B_1301 | 96% | 36% | 0.06 | 0.97 | 1.28 | 1.32 | 3 | 6 | 0 | 0 | 100% | 1 |
4FKX_CDP_C_201 | 95% | 59% | 0.073 | 0.979 | 0.79 | 0.76 | - | - | 0 | 0 | 100% | 1 |
3ETM_CDP_A_201 | 95% | 36% | 0.076 | 0.979 | 0.93 | 1.67 | - | 5 | 0 | 0 | 100% | 1 |