Ligand validation:3KQ4

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 3KQ4 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
3KQ4_NAG_B_2013	98%	31%	0.05	0.98	0.68	1.93	-	4	2	0	100%	1
3KQ4_NAG_D_2013	97%	30%	0.05	0.974	0.63	1.99	-	5	2	0	100%	1
3KQ4_NAG_F_2008	96%	52%	0.046	0.964	0.59	1.13	-	2	2	1	100%	1
3KQ4_NAG_F_2013	93%	34%	0.069	0.971	0.67	1.78	1	4	2	0	100%	1
3KQ4_NAG_D_2009	92%	58%	0.061	0.958	0.48	0.97	-	1	2	0	100%	1
3KQ4_NAG_B_2007	92%	53%	0.084	0.982	0.56	1.08	-	2	0	0	100%	1
3KQ4_NAG_B_2012	91%	26%	0.073	0.965	0.66	2.2	-	3	0	0	100%	1
3KQ4_NAG_D_2012	88%	38%	0.078	0.958	0.6	1.7	-	4	0	0	100%	1
3KQ4_NAG_D_2007	87%	54%	0.082	0.96	0.54	1.09	-	2	0	0	100%	1
3KQ4_NAG_F_2007	87%	53%	0.094	0.971	0.56	1.09	-	2	0	0	100%	1
3KQ4_NAG_F_2012	86%	30%	0.08	0.954	0.58	2.04	-	5	0	0	100%	1
3KQ4_NAG_F_2001	84%	26%	0.08	0.948	0.99	1.9	1	4	2	1	100%	1
3KQ4_NAG_F_2009	84%	58%	0.063	0.928	0.48	0.97	-	1	3	0	100%	1
3KQ4_NAG_B_2008	83%	52%	0.084	0.948	0.6	1.13	-	2	2	1	100%	1
3KQ4_NAG_B_2001	79%	26%	0.086	0.936	0.98	1.9	1	4	2	1	100%	1
3KQ4_NAG_D_2008	79%	52%	0.085	0.934	0.59	1.14	-	2	2	1	100%	1
3KQ4_NAG_D_2001	78%	26%	0.075	0.921	0.97	1.91	1	4	2	1	100%	1
3KQ4_NAG_B_2009	72%	58%	0.082	0.907	0.48	0.98	-	1	2	0	100%	1
3KQ4_NAG_C_2001	72%	15%	0.144	0.974	1.14	2.45	2	7	10	1	100%	0.53
3KQ4_NAG_A_2001	68%	15%	0.151	0.967	1.15	2.44	2	7	8	1	100%	0.53
3KQ4_NAG_E_2001	65%	15%	0.156	0.963	1.16	2.47	2	7	8	1	100%	0.53
2QFR_NAG_B_451	100%	64%	0.013	0.998	0.49	0.72	-	1	0	0	100%	1
5LDS_NAG_C_1003	100%	66%	0.016	0.997	0.54	0.62	-	-	3	0	100%	1
7DDF_NAG_B_401	100%	84%	0.016	0.996	0.21	0.49	-	-	0	0	100%	1
2HQM_NAG_A_1301	100%	62%	0.018	0.996	0.59	0.7	-	-	0	0	100%	1
3THD_NAG_C_704	100%	59%	0.019	0.994	0.45	0.96	-	-	0	0	100%	1

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

3KQ4 | pdb_00003kq4

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 3KQ4 designated by the RCSB