GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 3GJ7 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3GJ7_GDP_C_302 | 93% | 45% | 0.084 | 0.988 | 0.89 | 1.12 | 1 | 3 | 0 | 0 | 100% | 1 |
| 3GJ7_GDP_A_302 | 93% | 45% | 0.082 | 0.985 | 0.99 | 1.04 | 1 | 2 | 0 | 0 | 100% | 1 |
| 3GJ0_GDP_A_302 | 97% | 46% | 0.061 | 0.988 | 1 | 0.99 | 1 | 1 | 0 | 0 | 100% | 1 |
| 5CIW_GDP_A_301 | 97% | 37% | 0.06 | 0.983 | 0.85 | 1.48 | - | 3 | 0 | 0 | 100% | 1 |
| 3GJ8_GDP_A_302 | 96% | 45% | 0.067 | 0.987 | 0.94 | 1.08 | 1 | 3 | 0 | 0 | 100% | 1 |
| 5CIQ_GDP_A_301 | 96% | 39% | 0.068 | 0.983 | 1 | 1.29 | 1 | 4 | 0 | 0 | 100% | 1 |
| 5CIT_GDP_A_301 | 94% | 36% | 0.073 | 0.979 | 1.1 | 1.32 | 3 | 5 | 1 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 22% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9C3K_GDP_B_201 | 100% | 38% | 0.014 | 0.998 | 1.15 | 1.18 | 1 | 3 | 0 | 0 | 100% | 1 |
| 8ECR_GDP_A_302 | 100% | 28% | 0.017 | 0.998 | 1.48 | 1.32 | 2 | 4 | 0 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 44% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 36% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
