Ligand validation:3GDT

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
3GDT_UP6_A_301	99%	30%	0.042	0.988	1.27	1.41	3	3	0	100%	1
3GDT_UP6_B_301	98%	31%	0.049	0.985	1.28	1.37	1	3	0	100%	1
3GDT_UP6_D_301	88%	31%	0.079	0.96	1.28	1.39	2	3	0	100%	1
3GDT_UP6_C_301	88%	29%	0.084	0.964	1.29	1.46	2	3	0	100%	1
3GDL_UP6_A_301	99%	33%	0.039	0.983	1.23	1.32	2	4	0	100%	1
3PBW_UP6_A_229	100%	17%	0.026	0.995	1.1	2.39	1	7	1	100%	0.99
6ZX1_UP6_A_501	100%	15%	0.027	0.995	1.46	2.19	5	5	0	100%	1
3PBY_UP6_A_229	99%	18%	0.036	0.987	0.94	2.45	1	7	1	100%	0.93
4NX5_UP6_B_301	99%	4%	0.035	0.985	2.33	3.03	5	6	0	100%	1
1DVJ_UP6_A_5001	99%	35%	0.038	0.986	1.12	1.33	3	2	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

.id_divider{ color: #ccc; padding: 0 10px 0 10px; } .extended_id_info{ color: #ccc; font-size: 18px; position: relative; top: -10px; left: 4px; } 3GDT | pdb_00003gdt