UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 3EIC designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3EIC_UDP_E_165 | 100% | 32% | 0.032 | 0.99 | 1.08 | 1.51 | 1 | 5 | 0 | 0 | 100% | 1 |
| 3EIC_UDP_D_164 | 100% | 27% | 0.036 | 0.991 | 1.15 | 1.68 | 2 | 6 | 0 | 0 | 100% | 1 |
| 3EIC_UDP_A_161 | 99% | 28% | 0.039 | 0.989 | 1.1 | 1.68 | 1 | 5 | 1 | 0 | 100% | 1 |
| 3EIC_UDP_C_163 | 99% | 31% | 0.038 | 0.987 | 1.04 | 1.57 | 2 | 5 | 0 | 0 | 100% | 1 |
| 3EIC_UDP_B_162 | 99% | 34% | 0.043 | 0.986 | 1.04 | 1.45 | 1 | 4 | 1 | 0 | 100% | 1 |
| 3EIC_UDP_F_166 | 98% | 32% | 0.049 | 0.978 | 1.1 | 1.51 | 2 | 4 | 0 | 0 | 100% | 1 |
| 3FCW_UDP_A_138 | 86% | 32% | 0.078 | 0.951 | 1 | 1.6 | - | 5 | 3 | 0 | 100% | 1 |
| 3FBB_UDP_D_201 | 83% | 29% | 0.077 | 0.938 | 1.14 | 1.58 | 1 | 5 | 0 | 0 | 100% | 1 |
| 5F87_UDP_A_501 | 100% | 29% | 0.013 | 0.999 | 1.18 | 1.54 | 2 | 4 | 2 | 0 | 100% | 1 |
| 5V0T_UDP_B_501 | 100% | 69% | 0.014 | 0.999 | 0.43 | 0.61 | - | 1 | 0 | 0 | 100% | 1 |
| 7FGA_UDP_D_401 | 100% | 2% | 0.014 | 0.999 | 3.6 | 2.79 | 15 | 12 | 2 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.5 | 2.77 | 14 | 14 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.51 | 2.73 | 14 | 12 | 2 | 0 | 100% | 1 |
