U5P: URIDINE-5'-MONOPHOSPHATE
U5P is a Ligand Of Interest in 3DXG designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
| 3DXG_U5P_A_126 | 65% | 32% | 0.1 | 0.901 | 1.02 | 1.68 | 2 | 4 | 0 | 0 | 100% | 1 |
| 3DXG_U5P_A_125 | 63% | 38% | 0.092 | 0.885 | 1.03 | 1.4 | 1 | 5 | 0 | 0 | 100% | 1 |
| 3DXG_U5P_B_125 | 54% | 30% | 0.124 | 0.886 | 1.07 | 1.68 | 1 | 5 | 0 | 0 | 100% | 1 |
| 3JW1_U5P_B_201 | 41% | 25% | 0.14 | 0.854 | 1.14 | 1.9 | 2 | 5 | 0 | 0 | 100% | 1 |
| 6ZX0_U5P_A_502 | 100% | 72% | 0.021 | 0.996 | 0.47 | 0.6 | - | 1 | 0 | 0 | 100% | 0.25 |
| 7OQF_U5P_A_505 | 100% | 73% | 0.018 | 0.998 | 0.49 | 0.56 | - | 1 | 0 | 0 | 100% | 0.31 |
| 7OQI_U5P_B_505 | 100% | 72% | 0.016 | 0.998 | 0.45 | 0.64 | - | - | 0 | 0 | 100% | 0.81 |
| 7OQK_U5P_B_504 | 100% | 72% | 0.018 | 0.998 | 0.42 | 0.64 | - | - | 0 | 0 | 100% | 1 |
| 7AM9_U5P_A_502 | 100% | 70% | 0.019 | 0.997 | 0.52 | 0.62 | - | - | 2 | 0 | 100% | 0.28 |