NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
NDP is a Ligand Of Interest in 3DL5 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3DL5_NDP_B_610 | 70% | 36% | 0.147 | 0.967 | 1.39 | 1.2 | 5 | 4 | 8 | 0 | 100% | 1 |
| 3DL5_NDP_A_606 | 70% | 38% | 0.144 | 0.962 | 1.41 | 1.1 | 5 | 3 | 7 | 0 | 100% | 1 |
| 3DL5_NDP_D_618 | 50% | 38% | 0.176 | 0.929 | 1.4 | 1.13 | 3 | 3 | 5 | 0 | 100% | 1 |
| 3DL5_NDP_E_622 | 47% | 36% | 0.177 | 0.919 | 1.39 | 1.22 | 3 | 2 | 11 | 0 | 100% | 1 |
| 3DL5_NDP_C_614 | 45% | 38% | 0.178 | 0.912 | 1.39 | 1.12 | 3 | 2 | 10 | 0 | 100% | 1 |
| 3HJ3_NDP_B_610 | 84% | 38% | 0.114 | 0.976 | 1.31 | 1.19 | 4 | 6 | 6 | 0 | 100% | 1 |
| 6PFG_NDP_E_601 | 81% | 28% | 0.123 | 0.977 | 1.95 | 1.09 | 11 | 5 | 3 | 0 | 100% | 1 |
| 6PFC_NDP_E_601 | 81% | 28% | 0.129 | 0.982 | 1.94 | 1.09 | 11 | 5 | 2 | 0 | 100% | 1 |
| 6PFA_NDP_B_601 | 76% | 28% | 0.139 | 0.975 | 1.93 | 1.09 | 11 | 5 | 1 | 0 | 100% | 1 |
| 6PFI_NDP_A_601 | 75% | 28% | 0.144 | 0.98 | 1.94 | 1.13 | 11 | 6 | 3 | 0 | 100% | 1 |
| 1US0_NDP_A_318 | 100% | 46% | 0.027 | 0.998 | 1.21 | 0.91 | 3 | - | 4 | 0 | 100% | 1 |
| 2I16_NDP_A_319 | 100% | 46% | 0.028 | 0.998 | 1.2 | 0.9 | 3 | 1 | 0 | 0 | 100% | 1 |
| 2I17_NDP_A_319 | 100% | 46% | 0.029 | 0.998 | 1.22 | 0.89 | 3 | - | 0 | 0 | 100% | 1 |
| 2PF8_NDP_A_318 | 100% | 46% | 0.031 | 0.998 | 1.17 | 0.93 | 3 | - | 4 | 0 | 100% | 1 |
| 2PFH_NDP_A_318 | 100% | 29% | 0.03 | 0.998 | 1.79 | 1.2 | 8 | 7 | 4 | 0 | 100% | 1 |
