UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 3C4Q designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
| 3C4Q_UDP_B_600 | 38% | 28% | 0.144 | 0.847 | 0.98 | 1.78 | - | 7 | 1 | 0 | 100% | 1 |
| 3C4Q_UDP_A_600 | 35% | 21% | 0.147 | 0.835 | 1.29 | 1.89 | 4 | 8 | 0 | 0 | 100% | 1 |
| 3C4V_UDP_B_600 | 78% | 22% | 0.084 | 0.928 | 1.2 | 1.9 | 2 | 8 | 1 | 0 | 100% | 1 |
| 5F87_UDP_A_501 | 100% | 29% | 0.013 | 0.999 | 1.18 | 1.54 | 2 | 4 | 2 | 0 | 100% | 1 |
| 5V0T_UDP_B_501 | 100% | 69% | 0.014 | 0.999 | 0.43 | 0.61 | - | 1 | 0 | 0 | 100% | 1 |
| 7FGA_UDP_D_401 | 100% | 2% | 0.014 | 0.999 | 3.6 | 2.79 | 15 | 12 | 2 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.5 | 2.77 | 14 | 14 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_C_401 | 100% | 3% | 0.013 | 0.999 | 3.48 | 2.73 | 14 | 11 | 0 | 0 | 100% | 1 |