PP9: PROTOPORPHYRIN IX
PP9 is a Ligand Of Interest in 2QD1 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2QD1_PP9_B_702 | 48% | 11% | 0.153 | 0.895 | 1.82 | 2.53 | 8 | 8 | 10 | 0 | 100% | 1 |
| 2QD1_PP9_A_701 | 41% | 11% | 0.167 | 0.883 | 1.97 | 2.35 | 8 | 5 | 5 | 0 | 100% | 1 |
| 2QD1_PP9_C_705 | 39% | 10% | 0.161 | 0.868 | 1.97 | 2.48 | 8 | 7 | 15 | 0 | 100% | 1 |
| 2QD1_PP9_D_706 | 31% | 10% | 0.198 | 0.868 | 1.91 | 2.52 | 7 | 7 | 6 | 0 | 100% | 1 |
| 2QD1_PP9_D_703 | 23% | 18% | 0.181 | 0.805 | 1.72 | 1.96 | 7 | 5 | 3 | 0 | 100% | 1 |
| 2QD1_PP9_D_704 | 18% | 16% | 0.193 | 0.774 | 1.9 | 1.99 | 7 | 6 | 2 | 0 | 100% | 1 |
| 2HRE_PP9_C_605 | 58% | 17% | 0.157 | 0.935 | 1.8 | 2.01 | 8 | 4 | 5 | 0 | 100% | 1 |
| 2QD5_PP9_B_1105 | 46% | 1% | 0.178 | 0.916 | 5.28 | 2.92 | 20 | 15 | 1 | 0 | 100% | 1 |
| 4KLA_PP9_B_502 | 2% | 9% | 0.436 | 0.729 | 1.72 | 2.98 | 5 | 12 | 7 | 0 | 100% | 0.5 |
| 1Z53_PP9_A_296 | 99% | 19% | 0.051 | 0.98 | 2.05 | 1.56 | 6 | 10 | 0 | 0 | 100% | 1 |
| 6G71_PP9_A_501 | 86% | 31% | 0.083 | 0.952 | 1.66 | 1.19 | 5 | 3 | 1 | 0 | 100% | 1 |
| 5E9Z_PP9_A_502 | 86% | 55% | 0.105 | 0.974 | 0.55 | 1.15 | - | 2 | 0 | 0 | 100% | 1 |
