PP9: PROTOPORPHYRIN IX
PP9 is a Ligand Of Interest in 2QD1 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
| 2QD1_PP9_B_702 | 55% | 7% | 0.118 | 0.885 | 2.26 | 2.42 | 13 | 10 | 9 | 0 | 100% | 1 |
| 2QD1_PP9_A_701 | 55% | 7% | 0.114 | 0.88 | 2.08 | 2.55 | 11 | 9 | 5 | 0 | 100% | 1 |
| 2QD1_PP9_C_705 | 47% | 8% | 0.121 | 0.86 | 2.01 | 2.58 | 11 | 10 | 14 | 0 | 100% | 1 |
| 2QD1_PP9_D_706 | 46% | 7% | 0.126 | 0.859 | 2.12 | 2.66 | 12 | 10 | 4 | 0 | 100% | 1 |
| 2QD1_PP9_D_703 | 44% | 8% | 0.136 | 0.861 | 2.2 | 2.29 | 9 | 9 | 5 | 0 | 100% | 1 |
| 2QD1_PP9_D_704 | 33% | 7% | 0.162 | 0.841 | 2.37 | 2.27 | 8 | 8 | 4 | 0 | 100% | 1 |
| 2QD5_PP9_B_1105 | 74% | 0% | 0.109 | 0.941 | 9.04 | 3.01 | 21 | 12 | 7 | 0 | 100% | 1 |
| 2HRE_PP9_C_605 | 71% | 8% | 0.097 | 0.919 | 2.01 | 2.58 | 11 | 10 | 5 | 0 | 100% | 1 |
| 4KLA_PP9_B_502 | 6% | 1% | 0.268 | 0.712 | 3.04 | 4.62 | 8 | 18 | 7 | 0 | 100% | 0.5 |
| 1Z53_PP9_A_296 | 99% | 21% | 0.038 | 0.978 | 1.86 | 1.39 | 6 | 6 | 2 | 0 | 100% | 1 |
| 5E9Z_PP9_B_502 | 95% | 26% | 0.054 | 0.963 | 1.77 | 1.17 | 5 | 2 | 2 | 0 | 100% | 1 |
| 6G71_PP9_A_501 | 91% | 26% | 0.062 | 0.956 | 1.58 | 1.31 | 5 | 4 | 3 | 0 | 100% | 1 |