XYS: alpha-D-xylopyranose
XYS is a Ligand Of Interest in 2BFG designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2BFG_XYS_H_1504 | 36% | 10% | 0.151 | 0.865 | 2.25 | 2.01 | 3 | 3 | 2 | 0 | 90% | 1 |
| 2BFG_XYS_A_1507 | 33% | 18% | 0.2 | 0.902 | 1.88 | 1.53 | 3 | 2 | 1 | 0 | 90% | 0.3 |
| 2BFG_XYS_B_1504 | 31% | 15% | 0.164 | 0.851 | 2.16 | 1.51 | 4 | 2 | 1 | 0 | 90% | 1 |
| 2BFG_XYS_D_1507 | 26% | 14% | 0.217 | 0.883 | 1.91 | 1.81 | 2 | 3 | 1 | 0 | 90% | 0.4 |
| 2BFG_XYS_F_1504 | 25% | 9% | 0.172 | 0.832 | 2.31 | 2.12 | 4 | 2 | 0 | 0 | 90% | 1 |
| 2BFG_XYS_E_1504 | 23% | 9% | 0.177 | 0.822 | 2.18 | 2.19 | 4 | 3 | 0 | 0 | 90% | 1 |
| 2BFG_XYS_G_1504 | 22% | 11% | 0.17 | 0.807 | 2.02 | 2.08 | 4 | 3 | 1 | 0 | 90% | 1 |
| 2BFG_XYS_C_1504 | 11% | 11% | 0.234 | 0.778 | 2.22 | 1.89 | 4 | 2 | 1 | 0 | 90% | 1 |
| 1W9T_XYS_B_1146 | 100% | 42% | 0.033 | 0.988 | 0.79 | 1.34 | - | 1 | 3 | 0 | 100% | 0.5 |
| 6T8E_XYS_C_505 | 99% | 36% | 0.036 | 0.985 | 1.11 | 1.3 | 1 | 2 | 0 | 0 | 100% | 1 |
| 2CDC_XYS_D_1371 | 99% | 51% | 0.037 | 0.984 | 0.87 | 0.89 | 1 | - | 0 | 0 | 100% | 1 |
| 8OZ1_XYS_A_804 | 99% | 59% | 0.031 | 0.99 | 0.82 | 0.62 | - | - | 0 | 0 | 90% | 1 |
| 5L6G_XYS_A_512 | 99% | 62% | 0.042 | 0.981 | 0.45 | 0.84 | - | 1 | 0 | 0 | 100% | 1 |
