Ligand validation:2YP8

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
2YP8_NAG_A_1285	33%	45%	0.118	0.819	0.79	1.21	-	2	0	0	100%	1
2YP8_NAG_A_1063	30%	61%	0.121	0.812	0.46	0.83	-	-	0	0	100%	1
2YP8_NAG_A_1038	24%	58%	0.133	0.793	0.38	1.03	-	1	0	0	100%	1
2YP8_NAG_A_1133	5%	53%	0.181	0.677	0.55	1.08	-	1	0	1	100%	1
2YP8_NAG_A_1483	1%	53%	0.22	0.545	0.59	1.06	-	1	0	0	100%	1
2YP8_NAG_A_1126	1%	60%	0.179	0.425	0.57	0.79	-	-	0	0	100%	1
4WE8_NAG_A_608	67%	54%	0.083	0.925	0.49	1.11	-	1	0	0	100%	1
8FAW_NAG_A_601	55%	31%	0.101	0.9	0.67	2.01	-	4	1	0	100%	1
2YP2_NAG_A_804	44%	57%	0.104	0.853	0.46	0.99	-	1	0	0	100%	1
2YP7_NAG_A_802	44%	62%	0.103	0.851	0.4	0.84	-	-	0	0	100%	1
2YP3_NAG_A_1505	39%	61%	0.11	0.838	0.48	0.82	-	-	0	0	100%	1
2QFR_NAG_B_451	100%	63%	0.013	0.998	0.49	0.72	-	1	0	0	100%	1
5LDS_NAG_C_1003	100%	65%	0.016	0.997	0.54	0.62	-	-	3	0	100%	1
2HQM_NAG_A_1301	100%	61%	0.018	0.996	0.59	0.7	-	-	0	0	100%	1
3THD_NAG_B_702	100%	48%	0.019	0.995	0.71	1.18	-	-	0	0	100%	1
3H0C_NAG_A_796	100%	54%	0.02	0.995	0.47	1.12	-	1	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

2YP8 | pdb_00002yp8