UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 2WGZ designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2WGZ_UDP_A_1401 | 99% | 35% | 0.043 | 0.983 | 1 | 1.46 | 1 | 4 | 0 | 0 | 100% | 1 |
| 2WGZ_UDP_B_1401 | 97% | 35% | 0.051 | 0.977 | 0.98 | 1.47 | 1 | 4 | 0 | 0 | 100% | 1 |
| 1GX4_UDP_A_401 | 100% | 30% | 0.015 | 0.998 | 1.75 | 0.97 | 4 | 2 | 0 | 0 | 100% | 1 |
| 2VS3_UDP_B_401 | 97% | 37% | 0.054 | 0.976 | 0.97 | 1.39 | 1 | 5 | 0 | 0 | 100% | 1 |
| 1GX0_UDP_B_1369 | 95% | 21% | 0.056 | 0.97 | 2.06 | 1.2 | 4 | 5 | 0 | 0 | 100% | 1 |
| 2JCK_UDP_A_3361 | 95% | 7% | 0.061 | 0.971 | 2.91 | 1.77 | 11 | 9 | 0 | 0 | 100% | 1 |
| 1GWW_UDP_B_1369 | 94% | 38% | 0.062 | 0.97 | 1.27 | 1.06 | 2 | 3 | 0 | 0 | 100% | 1 |
| 5F87_UDP_A_501 | 100% | 29% | 0.013 | 0.999 | 1.18 | 1.54 | 2 | 4 | 2 | 0 | 100% | 1 |
| 5V0T_UDP_B_501 | 100% | 69% | 0.014 | 0.999 | 0.43 | 0.61 | - | 1 | 0 | 0 | 100% | 1 |
| 7FGA_UDP_D_401 | 100% | 2% | 0.014 | 0.999 | 3.6 | 2.79 | 15 | 12 | 2 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.5 | 2.77 | 14 | 14 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.51 | 2.73 | 14 | 12 | 2 | 0 | 100% | 1 |
