PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 2VYC designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2VYC_PLP_C_1386 | 71% | 16% | 0.149 | 0.969 | 1.94 | 1.72 | 3 | 5 | 0 | 0 | 100% | 0.5 |
| 2VYC_PLP_G_1386 | 68% | 13% | 0.155 | 0.966 | 1.95 | 2.01 | 4 | 6 | 0 | 0 | 100% | 0.5 |
| 2VYC_PLP_F_1386 | 64% | 13% | 0.159 | 0.958 | 1.94 | 2.03 | 4 | 7 | 0 | 0 | 100% | 0.5 |
| 2VYC_PLP_J_1386 | 63% | 15% | 0.17 | 0.965 | 2.02 | 1.75 | 4 | 5 | 0 | 0 | 100% | 0.5 |
| 2VYC_PLP_H_1386 | 60% | 12% | 0.182 | 0.97 | 1.97 | 2.06 | 4 | 4 | 1 | 0 | 100% | 0.5 |
| 2VYC_PLP_A_1386 | 60% | 18% | 0.171 | 0.958 | 2.05 | 1.52 | 3 | 3 | 0 | 0 | 100% | 0.5 |
| 2VYC_PLP_B_1386 | 58% | 14% | 0.167 | 0.945 | 1.91 | 1.91 | 3 | 5 | 1 | 0 | 100% | 0.5 |
| 2VYC_PLP_D_1386 | 51% | 17% | 0.203 | 0.957 | 1.9 | 1.75 | 4 | 4 | 1 | 0 | 100% | 0.5 |
| 2VYC_PLP_I_1386 | 50% | 12% | 0.2 | 0.953 | 2.08 | 1.95 | 4 | 4 | 0 | 0 | 100% | 0.5 |
| 2VYC_PLP_E_1386 | 49% | 17% | 0.2 | 0.949 | 1.97 | 1.65 | 4 | 3 | 1 | 0 | 100% | 0.5 |
| 2BIE_PLP_A_1361 | 100% | 38% | 0.024 | 0.996 | 1.23 | 1.19 | 1 | 3 | 1 | 0 | 100% | 1 |
| 2X3L_PLP_A_1211 | 100% | 19% | 0.024 | 0.995 | 1.74 | 1.73 | 2 | 2 | 1 | 0 | 100% | 1 |
| 3CEJ_PLP_A_832 | 100% | 41% | 0.021 | 0.998 | 1.23 | 1.05 | 1 | 2 | 8 | 0 | 100% | 1 |
| 3CEM_PLP_A_832 | 100% | 41% | 0.021 | 0.997 | 1.24 | 1.04 | 2 | 2 | 1 | 0 | 100% | 1 |
| 4PPM_PLP_A_902 | 100% | 7% | 0.019 | 0.998 | 2.88 | 1.91 | 9 | 6 | 0 | 0 | 100% | 1 |














