D5M: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
D5M is a Ligand Of Interest in 2QRO designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2QRO_D5M_A_503 | 59% | 35% | 0.174 | 0.958 | 0.93 | 1.73 | 1 | 4 | 6 | 0 | 100% | 1 |
| 2QRO_D5M_D_503 | 59% | 36% | 0.162 | 0.945 | 0.97 | 1.64 | 2 | 4 | 4 | 0 | 100% | 1 |
| 2QRO_D5M_C_503 | 47% | 34% | 0.19 | 0.93 | 1.03 | 1.65 | 3 | 4 | 6 | 0 | 100% | 1 |
| 2QRO_D5M_B_503 | 43% | 32% | 0.204 | 0.927 | 1.03 | 1.76 | 3 | 4 | 3 | 0 | 100% | 1 |
| 6B42_D5M_A_201 | 98% | 52% | 0.066 | 0.986 | 0.82 | 1.04 | 1 | 2 | 0 | 0 | 100% | 1 |
| 8HCG_D5M_A_306 | 95% | 34% | 0.078 | 0.982 | 1.69 | 1.02 | 7 | 1 | 0 | 0 | 100% | 1 |
| 2IOC_D5M_B_303 | 85% | 14% | 0.091 | 0.955 | 2.71 | 1.35 | 3 | 2 | 0 | 0 | 100% | 1 |
| 7A1F_D5M_A_403 | 74% | 6% | 0.122 | 0.953 | 3.2 | 2.13 | 7 | 4 | 1 | 0 | 100% | 1 |
| 4GYZ_D5M_A_401 | 59% | 23% | 0.185 | 0.968 | 1.91 | 1.41 | 6 | 3 | 0 | 0 | 100% | 1 |
