MGD: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE
MGD is a Ligand Of Interest in 2JIM designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2JIM_MGD_A_812 | 90% | 18% | 0.073 | 0.961 | 1.44 | 1.97 | 8 | 13 | 4 | 0 | 100% | 1 |
| 2JIM_MGD_A_811 | 89% | 19% | 0.08 | 0.965 | 1.57 | 1.81 | 7 | 11 | 3 | 0 | 100% | 1 |
| 2V3V_MGD_A_812 | 99% | 16% | 0.041 | 0.979 | 1.33 | 2.24 | 5 | 19 | 6 | 0 | 100% | 1 |
| 2JIQ_MGD_A_812 | 98% | 15% | 0.05 | 0.981 | 1.59 | 2.03 | 7 | 15 | 4 | 0 | 100% | 1 |
| 2JIO_MGD_A_812 | 96% | 13% | 0.06 | 0.977 | 1.62 | 2.22 | 7 | 16 | 10 | 0 | 100% | 1 |
| 2JIP_MGD_A_812 | 92% | 16% | 0.069 | 0.966 | 1.44 | 2.16 | 4 | 17 | 11 | 0 | 100% | 1 |
| 2V45_MGD_A_812 | 90% | 15% | 0.076 | 0.965 | 1.36 | 2.28 | 3 | 18 | 2 | 0 | 100% | 1 |
| 5E7O_MGD_G_1003 | 100% | 1% | 0.021 | 0.997 | 5.18 | 1.97 | 30 | 19 | 3 | 0 | 100% | 1 |
| 8CM5_MGD_A_1104 | 100% | 45% | 0.022 | 0.996 | 0.75 | 1.26 | 1 | 5 | 3 | 0 | 100% | 1 |
| 8R3A_MGD_A_912 | 100% | 43% | 0.026 | 0.994 | 0.92 | 1.18 | 2 | 4 | 2 | 0 | 100% | 1 |
| 3ML1_MGD_A_1804 | 100% | 21% | 0.027 | 0.994 | 1.34 | 1.86 | 8 | 17 | 2 | 0 | 100% | 1 |
| 7Z5O_MGD_AAA_1101 | 100% | 55% | 0.027 | 0.994 | 0.64 | 0.96 | - | 3 | 1 | 0 | 100% | 1 |
