CDP: CYTIDINE-5'-DIPHOSPHATE
CDP is a Ligand Of Interest in 2AZ3 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2AZ3_CDP_C_1300 | 84% | 35% | 0.112 | 0.975 | 1.28 | 1.29 | 3 | 5 | 3 | 0 | 100% | 1 |
| 2AZ3_CDP_B_1200 | 84% | 31% | 0.106 | 0.968 | 1.18 | 1.57 | 1 | 7 | 0 | 0 | 100% | 1 |
| 2AZ3_CDP_A_1100 | 82% | 25% | 0.109 | 0.963 | 1.38 | 1.66 | 3 | 9 | 0 | 0 | 100% | 1 |
| 2AZ3_CDP_E_1500 | 75% | 31% | 0.095 | 0.927 | 1.33 | 1.41 | 3 | 7 | 2 | 0 | 100% | 1 |
| 2AZ3_CDP_F_1600 | 71% | 32% | 0.111 | 0.93 | 1.28 | 1.41 | 3 | 4 | 0 | 0 | 100% | 1 |
| 2AZ3_CDP_D_1400 | 62% | 36% | 0.127 | 0.917 | 1.26 | 1.27 | 3 | 4 | 2 | 0 | 100% | 1 |
| 2AZ3_CDP_H_1800 | 58% | 31% | 0.118 | 0.897 | 1.27 | 1.48 | 2 | 4 | 0 | 0 | 100% | 1 |
| 2AZ3_CDP_I_1900 | 34% | 37% | 0.192 | 0.875 | 1.23 | 1.23 | 2 | 3 | 0 | 0 | 100% | 1 |
| 2AZ3_CDP_G_1700 | 23% | 29% | 0.222 | 0.845 | 1.29 | 1.54 | 3 | 6 | 1 | 0 | 100% | 1 |
| 6SDK_CDP_C_301 | 100% | 5% | 0.043 | 0.987 | 3.72 | 1.58 | 12 | 6 | 0 | 0 | 100% | 1 |
| 3BOS_CDP_B_300 | 100% | 55% | 0.046 | 0.988 | 0.92 | 0.81 | 1 | 1 | 0 | 0 | 100% | 1 |
| 8VHP_CDP_D_809 | 98% | 52% | 0.051 | 0.975 | 0.89 | 0.96 | - | 2 | 2 | 0 | 100% | 1 |
| 9LJR_CDP_A_601 | 97% | 6% | 0.061 | 0.976 | 4.11 | 1.06 | 16 | 3 | 0 | 0 | 100% | 1 |
| 3EE3_CDP_C_162 | 97% | 43% | 0.054 | 0.967 | 1.26 | 0.97 | 2 | 2 | 1 | 0 | 100% | 1 |
