GPP: GERANYL DIPHOSPHATE
GPP is a Ligand Of Interest in 1YQN designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1YQN_GPP_A_300 | 0% | 42% | 0.369 | 0.704 | 0.8 | 1.36 | 1 | 2 | 0 | 0 | 100% | 0.33 |
| 2AMT_GPP_A_7903 | 51% | 47% | 0.15 | 0.974 | 0.69 | 1.23 | - | 1 | 1 | 0 | 100% | 0.33 |
| 3ESJ_GPP_A_904 | 33% | 33% | 0.182 | 0.936 | 1.25 | 1.41 | 3 | 3 | 14 | 0 | 100% | 0.61 |
| 3ELC_GPP_C_904 | 19% | 13% | 0.173 | 0.837 | 2.41 | 1.52 | 8 | 3 | 2 | 0 | 100% | 1 |
| 3ERN_GPP_B_901 | 14% | 14% | 0.183 | 0.811 | 2.42 | 1.43 | 7 | 5 | 3 | 0 | 100% | 1 |
| 3EOR_GPP_A_902 | 2% | 0% | 0.292 | 0.781 | 6.5 | 3.43 | 12 | 8 | 3 | 0 | 100% | 0.33 |
| 2VG3_GPP_C_1298 | 100% | 7% | 0.023 | 0.998 | 2.73 | 2.09 | 4 | 5 | 0 | 0 | 100% | 1 |
| 4TQ3_GPP_D_401 | 97% | 43% | 0.038 | 0.993 | 0.57 | 1.5 | - | 5 | 1 | 0 | 100% | 1 |
| 8A7L_GPP_A_506 | 95% | 63% | 0.045 | 0.991 | 0.57 | 0.67 | - | - | 0 | 0 | 100% | 1 |
| 8A7U_GPP_A_506 | 92% | 53% | 0.049 | 0.983 | 0.77 | 0.9 | - | 1 | 0 | 0 | 100% | 1 |
| 8A78_GPP_A_505 | 90% | 61% | 0.051 | 0.98 | 0.62 | 0.7 | - | - | 1 | 0 | 100% | 1 |














