CDP: CYTIDINE-5'-DIPHOSPHATE
CDP is a Ligand Of Interest in 1YQN designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1YQN_CDP_A_200 | 74% | 48% | 0.081 | 0.962 | 1.05 | 0.85 | 3 | 1 | 0 | 0 | 100% | 1 |
| 1U3L_CDP_A_669 | 78% | 19% | 0.072 | 0.965 | 1.74 | 1.67 | 5 | 5 | 9 | 0 | 100% | 1 |
| 1GX1_CDP_B_1157 | 50% | 37% | 0.116 | 0.908 | 1.24 | 1.21 | 3 | 2 | 0 | 0 | 100% | 1 |
| 2VBU_CDP_A_1133 | 96% | 43% | 0.039 | 0.988 | 0.88 | 1.22 | - | 3 | 0 | 0 | 100% | 1 |
| 6SDK_CDP_C_301 | 95% | 5% | 0.043 | 0.987 | 3.7 | 1.62 | 12 | 7 | 0 | 0 | 100% | 1 |
| 7O0N_CDP_A_301 | 93% | 9% | 0.047 | 0.984 | 3.46 | 1.06 | 17 | 1 | 0 | 0 | 100% | 1 |
| 4FKX_CDP_C_201 | 93% | 56% | 0.046 | 0.982 | 0.8 | 0.73 | - | - | 0 | 0 | 100% | 1 |
| 2OYN_CDP_A_301 | 93% | 45% | 0.045 | 0.98 | 0.95 | 1.07 | 1 | 3 | 0 | 0 | 100% | 1 |
