Ligand validation:1VYS

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
1VYS_TNF_X_500	46%	4%	0.155	0.955	3.03	2.52	7	5	0	100%	0.5
1VYP_TNF_X_500	21%	7%	0.159	0.823	3.19	1.63	6	4	2	100%	1
1VYR_TNF_A_1402	6%	1%	0.21	0.763	3.34	3.78	6	5	2	100%	0.28
1GVS_TNF_A_500	5%	12%	0.186	0.687	2.44	1.61	3	5	0	100%	0.99
8TCL_TNF_B_503	90%	29%	0.048	0.973	1.42	1.42	3	2	0	100%	0.5
8TCM_TNF_B_503	86%	30%	0.056	0.968	1.8	1.03	3	1	0	100%	0.5
5K1U_TNF_A_401	71%	49%	0.072	0.934	0.62	1.23	-	2	1	100%	0.47
5K1W_TNF_A_402	48%	46%	0.115	0.9	0.8	1.18	-	2	1	100%	1
4JEW_TNF_A_507	34%	14%	0.117	0.832	2.17	1.62	4	3	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

1VYS | pdb_00001vys